| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ytfP [H]
Identifier: 86607819
GI number: 86607819
Start: 336591
End: 336959
Strand: Reverse
Name: ytfP [H]
Synonym: CYB_0319
Alternate gene names: 86607819
Gene position: 336959-336591 (Counterclockwise)
Preceding gene: 86607820
Following gene: 86607814
Centisome position: 11.06
GC content: 58.54
Gene sequence:
>369_bases ATGCAACCGACCACAGTGGTTTTTGTCTACGGATCCCTGCTGCGGGGCGGCCAATACCACAGCTTGCTGCAGGGGGCAGA ATTTTTGGGGACAGACAGCCTCAACCACATTGATCTTTACAGTCTCGGCCCCTACCCGATGGCAGTTCGTGGCCGAAACC GGCTCTACGGCGAGTGCTACCGCATCCCCTTGAGTCTATTGCCCCGATTGGACGAACTGGAAGACCACCCGCGGGTGTAC GAACGGCAGTGGGTGCAACTGGATAGCGGCACCTTTGCTTGGGTTTATCTGGGTCGGCCTGAGCAGGTGCAAGGGTGCTC GCTCATCCCCAGTGGCCGCTGGCTGGTTAGAGATCAAAGTGGAGCTTGA
Upstream 100 bases:
>100_bases GCGCCTACTGGCCGGGTCGGAGCCGCGCATTGGCCAAAAATGGACGCAATCTCCCTAATTTTCAAGGCACTGTGAAGCAG CTGTATTACTCCGCAACGCT
Downstream 100 bases:
>100_bases CGCCCTCAACATACTGGGGCGGCAACAAAGACTCTATCCCACTGTTGTGCTCCGCACCACTGTCGCGAACGCGAGTGTGA ACGGCTGCGGACGGATCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MQPTTVVFVYGSLLRGGQYHSLLQGAEFLGTDSLNHIDLYSLGPYPMAVRGRNRLYGECYRIPLSLLPRLDELEDHPRVY ERQWVQLDSGTFAWVYLGRPEQVQGCSLIPSGRWLVRDQSGA
Sequences:
>Translated_122_residues MQPTTVVFVYGSLLRGGQYHSLLQGAEFLGTDSLNHIDLYSLGPYPMAVRGRNRLYGECYRIPLSLLPRLDELEDHPRVY ERQWVQLDSGTFAWVYLGRPEQVQGCSLIPSGRWLVRDQSGA >Mature_122_residues MQPTTVVFVYGSLLRGGQYHSLLQGAEFLGTDSLNHIDLYSLGPYPMAVRGRNRLYGECYRIPLSLLPRLDELEDHPRVY ERQWVQLDSGTFAWVYLGRPEQVQGCSLIPSGRWLVRDQSGA
Specific function: Unknown
COG id: COG2105
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamylcyclotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790668, Length=114, Percent_Identity=42.9824561403509, Blast_Score=75, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009288 - InterPro: IPR013024 [H]
Pfam domain/function: PF06094 AIG2 [H]
EC number: NA
Molecular weight: Translated: 13900; Mature: 13900
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPTTVVFVYGSLLRGGQYHSLLQGAEFLGTDSLNHIDLYSLGPYPMAVRGRNRLYGECY CCCCEEEEEEECHHCCCCHHHHHHCCHHCCCCCCCCEEEEEECCCCEEECCCCCCCCHHE RIPLSLLPRLDELEDHPRVYERQWVQLDSGTFAWVYLGRPEQVQGCSLIPSGRWLVRDQS ECCHHHCCCCCCCCCCCCCHHHEEEEECCCCEEEEEECCCCCCCCCEECCCCCEEEEECC GA CC >Mature Secondary Structure MQPTTVVFVYGSLLRGGQYHSLLQGAEFLGTDSLNHIDLYSLGPYPMAVRGRNRLYGECY CCCCEEEEEEECHHCCCCHHHHHHCCHHCCCCCCCCEEEEEECCCCEEECCCCCCCCHHE RIPLSLLPRLDELEDHPRVYERQWVQLDSGTFAWVYLGRPEQVQGCSLIPSGRWLVRDQS ECCHHHCCCCCCCCCCCCCHHHEEEEECCCCEEEEEECCCCCCCCCEECCCCCEEEEECC GA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]