Click here to switch to the map view.

The map label for this gene is yfgC [H]

Identifier: 86607814

GI number: 86607814

Start: 330804

End: 331757

Strand: Reverse

Name: yfgC [H]

Synonym: CYB_0315

Alternate gene names: 86607814

Gene position: 331757-330804 (Counterclockwise)

Preceding gene: 86607819

Following gene: 86607813

Centisome position: 10.89

GC content: 62.05

Gene sequence:

>954_bases
ATGTTGAAACCTCGCCACACCCTCAGGCTGCTCGCGCCAGCAGGACAGGATCCTCTCCTCTCCAAGGGGTGGAGTTCTCG
CGCGGTGAGACCGGTCGCCATTGCCCTACTCAGCATTCTTGCGGCATCTGGGATGGGATCCCCTGCCCATGCCCAAGATC
TGGGCCGTTTGCTGATTCATGGCCTTCAGTGGCTGCAGGTGAGCCAGTTGAACGATGCCCAAGAGGTGAGCTTAGGCCGC
CAGATCGATCGACAACTGAAAGCGCGGGGACAACTTCGCCTCAGTTCGGATCCCTACTGGGTCGAGCGGGTGAACCGCAT
TGGCCAACGGGTGGCCGCCCACAGCGAACGGCCCCATCTGCCCTACACCTTTCAAGTGGTGGAAGATCCCGACATCAACG
CCTTTGCCACACTGGGAGGCTTTGTCTACATCACCACTGGTGCCCTCGCAGCCGCCGACAACGACGACCAGATTGCCGCC
GTGCTGGCCCACGAGGTGGCTCACATCGGCGAACGCCACGGCCTGCAACAACTGCAGCAGGCTGCCACTGCCCAGTTTGG
GGCTCAATTGTTGGGGCTCAACGACAGTACCCTGGCCGCTCTGGCCCTGGAATTGGGAGTACGGCGCCCGCAGAGCCGTG
AGAACGAGTTTATCGCCGATGAAAAAGGTCTGGGGGCAGCCTATCGCGCCGGGTTTGACCCGCAGGGCATGCCGCAATTT
TTGGCCAAGTTGCAATCCCGCGGATCTGTGCCAGAGTTCCTGCGCACCCATCCCCCCGTCTCGGAGCGCATTGCCCGCCT
CAACCAGCTCATCATTCAGCACGGCATGGTCAGCCCAGCCGGTCAGACCGTTCCACTCCACGGCTCCGGCGGCTCCATTT
GGCCCTCCGGATCCCCCGAACAAACCCAACGCACCGAGATTGAGATCCTGCCGCTACTCCCTGTCCTGCCCTAA

Upstream 100 bases:

>100_bases
TCGGCGGTTGCCCTTGATAGCAAAGCGGTTTCGCTTGGGTGGCAGGACAATCTTGCTTCGGGATCGCTAACTTGAGGGTA
CTTGATGGAGCCAATTCCTG

Downstream 100 bases:

>100_bases
CTCGGCACAGAGGGATCCCTTCTGCCCAAGGCCGGCTGAAATGGCTCTCGCTCCCAATCTTTGGCCTTGATGACTTCCTG
TGTTTCTTGGTCGGGGATGG

Product: M48B family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MLKPRHTLRLLAPAGQDPLLSKGWSSRAVRPVAIALLSILAASGMGSPAHAQDLGRLLIHGLQWLQVSQLNDAQEVSLGR
QIDRQLKARGQLRLSSDPYWVERVNRIGQRVAAHSERPHLPYTFQVVEDPDINAFATLGGFVYITTGALAAADNDDQIAA
VLAHEVAHIGERHGLQQLQQAATAQFGAQLLGLNDSTLAALALELGVRRPQSRENEFIADEKGLGAAYRAGFDPQGMPQF
LAKLQSRGSVPEFLRTHPPVSERIARLNQLIIQHGMVSPAGQTVPLHGSGGSIWPSGSPEQTQRTEIEILPLLPVLP

Sequences:

>Translated_317_residues
MLKPRHTLRLLAPAGQDPLLSKGWSSRAVRPVAIALLSILAASGMGSPAHAQDLGRLLIHGLQWLQVSQLNDAQEVSLGR
QIDRQLKARGQLRLSSDPYWVERVNRIGQRVAAHSERPHLPYTFQVVEDPDINAFATLGGFVYITTGALAAADNDDQIAA
VLAHEVAHIGERHGLQQLQQAATAQFGAQLLGLNDSTLAALALELGVRRPQSRENEFIADEKGLGAAYRAGFDPQGMPQF
LAKLQSRGSVPEFLRTHPPVSERIARLNQLIIQHGMVSPAGQTVPLHGSGGSIWPSGSPEQTQRTEIEILPLLPVLP
>Mature_317_residues
MLKPRHTLRLLAPAGQDPLLSKGWSSRAVRPVAIALLSILAASGMGSPAHAQDLGRLLIHGLQWLQVSQLNDAQEVSLGR
QIDRQLKARGQLRLSSDPYWVERVNRIGQRVAAHSERPHLPYTFQVVEDPDINAFATLGGFVYITTGALAAADNDDQIAA
VLAHEVAHIGERHGLQQLQQAATAQFGAQLLGLNDSTLAALALELGVRRPQSRENEFIADEKGLGAAYRAGFDPQGMPQF
LAKLQSRGSVPEFLRTHPPVSERIARLNQLIIQHGMVSPAGQTVPLHGSGGSIWPSGSPEQTQRTEIEILPLLPVLP

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=224, Percent_Identity=35.7142857142857, Blast_Score=111, Evalue=7e-26,
Organism=Saccharomyces cerevisiae, GI6322940, Length=168, Percent_Identity=35.7142857142857, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 34317; Mature: 34317

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPRHTLRLLAPAGQDPLLSKGWSSRAVRPVAIALLSILAASGMGSPAHAQDLGRLLIH
CCCCCCCEEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GLQWLQVSQLNDAQEVSLGRQIDRQLKARGQLRLSSDPYWVERVNRIGQRVAAHSERPHL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCC
PYTFQVVEDPDINAFATLGGFVYITTGALAAADNDDQIAAVLAHEVAHIGERHGLQQLQQ
CEEEEEECCCCCCHHHHHCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AATAQFGAQLLGLNDSTLAALALELGVRRPQSRENEFIADEKGLGAAYRAGFDPQGMPQF
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHH
LAKLQSRGSVPEFLRTHPPVSERIARLNQLIIQHGMVSPAGQTVPLHGSGGSIWPSGSPE
HHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCC
QTQRTEIEILPLLPVLP
CCCCCEEEEEECCCCCC
>Mature Secondary Structure
MLKPRHTLRLLAPAGQDPLLSKGWSSRAVRPVAIALLSILAASGMGSPAHAQDLGRLLIH
CCCCCCCEEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GLQWLQVSQLNDAQEVSLGRQIDRQLKARGQLRLSSDPYWVERVNRIGQRVAAHSERPHL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCC
PYTFQVVEDPDINAFATLGGFVYITTGALAAADNDDQIAAVLAHEVAHIGERHGLQQLQQ
CEEEEEECCCCCCHHHHHCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AATAQFGAQLLGLNDSTLAALALELGVRRPQSRENEFIADEKGLGAAYRAGFDPQGMPQF
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHH
LAKLQSRGSVPEFLRTHPPVSERIARLNQLIIQHGMVSPAGQTVPLHGSGGSIWPSGSPE
HHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCC
QTQRTEIEILPLLPVLP
CCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]