Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is yfbI [C]

Identifier: 86607809

GI number: 86607809

Start: 323019

End: 324797

Strand: Reverse

Name: yfbI [C]

Synonym: CYB_0310

Alternate gene names: 86607809

Gene position: 324797-323019 (Counterclockwise)

Preceding gene: 86607810

Following gene: 86607808

Centisome position: 10.66

GC content: 61.72

Gene sequence:

>1779_bases
ATGCGTCCTTTCGGCAACCCCAACCGTCTGGGCAGTTCTCCTAGCCGCAGATCCCTGCCGGGATCCAGCTCCTTCGTTCA
GTTTCGCCGCGACCCGCACCTAGTGCCCTTTTGGGGCCTAAGCCTACTAGTCATGGGCCTGGCAGTGCCTCTGTTTGTGC
TTTCGGGGGCGGATCCCAGTTTGGCCGGCTGCGACGAGAGCTTTTATGCCCAAATGGCCCGCGAGCTGCTGCGGGGAGGG
CATTGGCTGGGGCCCACTTTTTTGGGGGAGCCTTTTTTCGAGAAACCCCCTCTGCTCACCTGGAGCGTGGCCCTCAGTTT
TGCCCTGTACGGGGTAAACGAGTGGGCAGCGCGGCTGCCAGGGATCCTCGCTGCTTTGCTCTCCATTCCCCTGGTGGGTT
GGATTGGGTGGTTTTTTTTGCCGATGCGGGCGGCCTTTTTGGGGATGGCGGTTTTGCCCCTGTGCTACCTCTGGGTGCAG
CAGGGGCGGCTGGTGGGGCAGGATGTGCCCTTGACCTTTCTGGAGCTGCTGGGGATCCTGGGGCTGGTCAACGGTATCCG
CGGCCACAGGGTTTGGTTTTGGCTAACCGGAGTGGCCTTCGGGCTGGGCCTGCTGATGAAAAGTGCCATGATCCTGCTGC
CGGGGGCGGCTTTGATCCCCTATCTCGTGCAGCAACGGCGCCGCTGGATGGGATCCGCCCCATTTTGGCTGGCGCTTGGG
CTGGGCTTGGGGATTTTTGGCCTCTGGCTAGGTCCAGCCATGCAGGTGTATGGCCCACAGGTGCTGACCACCCTGGTGGG
GAAGGTGTGGGATCTGGGGCAAGAGCCCTTCCATGCGGATGCCACCGGCTGGTACTACTTTTGGCACATTCCCGTTCATG
GCTTCCCGTGGACGGTTTTGGCTTTGGTGGGTGGCTTTCTCCTGGTGCGCCAGCAGCCGGGATCCACGCTGCTAATCTGG
TCTTTCCCCCTGCTGCTGCTGTTGTTGTTGCAGCTTTATCCCACCAAAACCCCCTACTACACCGTGCAGCTTTACCCTTG
GCTGGCTCTCTTGGCCGGGGTAGCCTTGGATCAAGCGTTGGCTATGCGGGGTCGCGTCAGCGGTGCGGATCGCGTTAGCG
GGACGGAGTCCTTGCACTTAAAGCCCCGTCTGGCTCAGGTGATCTCTTGGGGCCTGGCAGCGGTGGGGCTGCTGCTGTTG
GGTTTGGGGGTGGCCGTCCGGCTGGGCGTAGACGGTCTGGAGCTTCTGCAATCCCACGCTTGGCCGCTGGTGGCGATGGG
TCTTTTGTACCTCTTGCTGCCGGGGATCTGGAGTTGGTGGCGGGTGTTGCGCTGCGCCGGCGAGCTGTGGGTGGGAATCC
TCTTGTTGGCCGGGATCCTCGCCATGATCACCATCGTCTTGCGGCCTGATTTCGGCAACTTCAGCCCTGCTTTTGCCCAA
ATGGATTGGAACCAAATGCTGCCCCCGTCCGTTCGCGCTATTCGGACGGAGTCCTCGACAGAGTCTGGGGAGACGGTGGT
GGATATTGGCCGCAGCGGCTTGCCGGATGTCTGTCAGGCCCAGGCCATCGCTTTTTATACCCCTAATCCGGGGAGATGGG
TGGATGATCAGGCTCTGCGACGAGGGGAGCATGGAGACTACCTTTGGGTATCTCCGGTGCAGGCAGAACAGGTGGAGATC
CGGGATTTGGGGTTACAACCTCTGGCGGAGGTGGAGGGCTGGCAACTGGTGCGCCGTTTGGATCCCCTCTTGGAGCAGGG
CAGCGGGGAGCCTCTTTGA

Upstream 100 bases:

>100_bases
AAAATTCTGCCGCTCGCGTAAGCGGGACGGAGTCCTTGTCTAGTCTGGTTAGAGCCGCCCCTTGCTGACTTGTCCCATCG
CGTTAGCGGGACGGAGTCCC

Downstream 100 bases:

>100_bases
GTTTAAAAATCTTAAGTTTAAGAATCCTAGGAAGTGTTAAAGCATGGCGGGAATAGCGGAATCGGGCCGGTCGTGGGTGT
CTCTAGAGCGTACCTGGGTA

Product: dolichyl-phosphate-mannose-protein mannosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 592

Protein sequence:

>592_residues
MRPFGNPNRLGSSPSRRSLPGSSSFVQFRRDPHLVPFWGLSLLVMGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGG
HWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARLPGILAALLSIPLVGWIGWFFLPMRAAFLGMAVLPLCYLWVQ
QGRLVGQDVPLTFLELLGILGLVNGIRGHRVWFWLTGVAFGLGLLMKSAMILLPGAALIPYLVQQRRRWMGSAPFWLALG
LGLGIFGLWLGPAMQVYGPQVLTTLVGKVWDLGQEPFHADATGWYYFWHIPVHGFPWTVLALVGGFLLVRQQPGSTLLIW
SFPLLLLLLLQLYPTKTPYYTVQLYPWLALLAGVALDQALAMRGRVSGADRVSGTESLHLKPRLAQVISWGLAAVGLLLL
GLGVAVRLGVDGLELLQSHAWPLVAMGLLYLLLPGIWSWWRVLRCAGELWVGILLLAGILAMITIVLRPDFGNFSPAFAQ
MDWNQMLPPSVRAIRTESSTESGETVVDIGRSGLPDVCQAQAIAFYTPNPGRWVDDQALRRGEHGDYLWVSPVQAEQVEI
RDLGLQPLAEVEGWQLVRRLDPLLEQGSGEPL

Sequences:

>Translated_592_residues
MRPFGNPNRLGSSPSRRSLPGSSSFVQFRRDPHLVPFWGLSLLVMGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGG
HWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARLPGILAALLSIPLVGWIGWFFLPMRAAFLGMAVLPLCYLWVQ
QGRLVGQDVPLTFLELLGILGLVNGIRGHRVWFWLTGVAFGLGLLMKSAMILLPGAALIPYLVQQRRRWMGSAPFWLALG
LGLGIFGLWLGPAMQVYGPQVLTTLVGKVWDLGQEPFHADATGWYYFWHIPVHGFPWTVLALVGGFLLVRQQPGSTLLIW
SFPLLLLLLLQLYPTKTPYYTVQLYPWLALLAGVALDQALAMRGRVSGADRVSGTESLHLKPRLAQVISWGLAAVGLLLL
GLGVAVRLGVDGLELLQSHAWPLVAMGLLYLLLPGIWSWWRVLRCAGELWVGILLLAGILAMITIVLRPDFGNFSPAFAQ
MDWNQMLPPSVRAIRTESSTESGETVVDIGRSGLPDVCQAQAIAFYTPNPGRWVDDQALRRGEHGDYLWVSPVQAEQVEI
RDLGLQPLAEVEGWQLVRRLDPLLEQGSGEPL
>Mature_592_residues
MRPFGNPNRLGSSPSRRSLPGSSSFVQFRRDPHLVPFWGLSLLVMGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGG
HWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARLPGILAALLSIPLVGWIGWFFLPMRAAFLGMAVLPLCYLWVQ
QGRLVGQDVPLTFLELLGILGLVNGIRGHRVWFWLTGVAFGLGLLMKSAMILLPGAALIPYLVQQRRRWMGSAPFWLALG
LGLGIFGLWLGPAMQVYGPQVLTTLVGKVWDLGQEPFHADATGWYYFWHIPVHGFPWTVLALVGGFLLVRQQPGSTLLIW
SFPLLLLLLLQLYPTKTPYYTVQLYPWLALLAGVALDQALAMRGRVSGADRVSGTESLHLKPRLAQVISWGLAAVGLLLL
GLGVAVRLGVDGLELLQSHAWPLVAMGLLYLLLPGIWSWWRVLRCAGELWVGILLLAGILAMITIVLRPDFGNFSPAFAQ
MDWNQMLPPSVRAIRTESSTESGETVVDIGRSGLPDVCQAQAIAFYTPNPGRWVDDQALRRGEHGDYLWVSPVQAEQVEI
RDLGLQPLAEVEGWQLVRRLDPLLEQGSGEPL

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 39 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=317, Percent_Identity=25.5520504731861, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: NA

Molecular weight: Translated: 65265; Mature: 65265

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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CCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]