| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is argC [H]
Identifier: 86607788
GI number: 86607788
Start: 301582
End: 302688
Strand: Direct
Name: argC [H]
Synonym: CYB_0289
Alternate gene names: 86607788
Gene position: 301582-302688 (Clockwise)
Preceding gene: 86607786
Following gene: 86607789
Centisome position: 9.9
GC content: 61.34
Gene sequence:
>1107_bases ATGGCCAACATGGCGCCCCGCCCACCCCACCCCACAGAGCCTGTCCGCATTGGCATTGTCGGCGCTTCCGGCTACGGAGG GGTACAGTTGGTGCGGTTACTGAGCGAGCATCCCGGCGTGCAGATCACCTACCTGGCCGGGCAAGACAGTGCCGGCAAGC GCTACGGGGATCTCTATCCCCAGTTGGCCCAGGCCGTGGATCTGACCGTTCAGCCGGTAGAGGTGGATCGTATTGCCGCC AACAGCGATGTGGTGTTTTTGTCTCTCCCCAATGGGCTGGCTGCCGAGCTGGCCCCGCCCTTGCTGGCCAAAGGGTGCAA AGTCTTAGATCTGTCGGCGGATTACCGCTTTCGCAACCTGGCCACCTACCAATCTTGGTACCGCATGGGTCAGACGGATC CCAACTGGCCCAGCCCTGCCTATCGCCAGGCCAATGAGCAGGCGGTCTATGGGTTGCCGGAACTTTATCGCGAGGCGATT GCCCAAGCCCAACTGGTGGGCTGTCCCGGCTGTTATCCCACTGCTTCATTGTTGGCGGTTGCTCCTCTGCTGCGGCAGGG GTTGGTGGAGCTGGACAGCCTCATTTTCGATGCCAAATCCGGCGTTTCGGGGGCAGGTCGTACCCCCAAGGTGGGATCCC TGTTTGCCGAAGTGGACGGCTCTCTGGCAGCCTATGGAGTGGCCCAGCACCGCCATACGCCCGAGATCGAGCAAGCTTGC ACCGACCTGACCCACACCCCCATCACCGTGCAATTTACGCCCCATCTGGTGCCCATGGTGCGGGGGATCCACGTCACCTT GTATGCCACCCTGCGGGATCCCGGCTTTGTGGGGGAAGATTTGCTCACCATTTACAACGCTTTCTATCGCCAATCTCCCT GGGTGAAGGTGCTGCCGCGGGGGGTCTACCCGCAAACCAAATGGGTCTCCGGCACCAACACCTGCATGATCGGGGTGGAG GTGGACAGCCGCACCAACCGCGTTATCGTCCTGTCGGTGATCGATAACCTGATGAAAGGGCAAGCCGGGCAGGCAGTGCA GTGTCTCAACCTGATGATGGGATGGCCGGAAACGTTGGGTTTGCCTCGGCTGGCGTTTTACCCCTAG
Upstream 100 bases:
>100_bases AAGATGGGATCCGCACCCATGCAGCGTCAAATGCAGCAGAAAAATGCGGTAGAACTTAAGGCAAGCCATCACGCAACCCT CTTGCACAGGCAGCCCCCCC
Downstream 100 bases:
>100_bases CTATAATGCCGGTAATCCCCTTGAAGCGGATTCTGTCCATGTCTGAACCCCTGAATCCCCCTTTCCATTCCGAGCCCCAA AACGCCTCGCCCAGCTCAAA
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase [H]
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MANMAPRPPHPTEPVRIGIVGASGYGGVQLVRLLSEHPGVQITYLAGQDSAGKRYGDLYPQLAQAVDLTVQPVEVDRIAA NSDVVFLSLPNGLAAELAPPLLAKGCKVLDLSADYRFRNLATYQSWYRMGQTDPNWPSPAYRQANEQAVYGLPELYREAI AQAQLVGCPGCYPTASLLAVAPLLRQGLVELDSLIFDAKSGVSGAGRTPKVGSLFAEVDGSLAAYGVAQHRHTPEIEQAC TDLTHTPITVQFTPHLVPMVRGIHVTLYATLRDPGFVGEDLLTIYNAFYRQSPWVKVLPRGVYPQTKWVSGTNTCMIGVE VDSRTNRVIVLSVIDNLMKGQAGQAVQCLNLMMGWPETLGLPRLAFYP
Sequences:
>Translated_368_residues MANMAPRPPHPTEPVRIGIVGASGYGGVQLVRLLSEHPGVQITYLAGQDSAGKRYGDLYPQLAQAVDLTVQPVEVDRIAA NSDVVFLSLPNGLAAELAPPLLAKGCKVLDLSADYRFRNLATYQSWYRMGQTDPNWPSPAYRQANEQAVYGLPELYREAI AQAQLVGCPGCYPTASLLAVAPLLRQGLVELDSLIFDAKSGVSGAGRTPKVGSLFAEVDGSLAAYGVAQHRHTPEIEQAC TDLTHTPITVQFTPHLVPMVRGIHVTLYATLRDPGFVGEDLLTIYNAFYRQSPWVKVLPRGVYPQTKWVSGTNTCMIGVE VDSRTNRVIVLSVIDNLMKGQAGQAVQCLNLMMGWPETLGLPRLAFYP >Mature_367_residues ANMAPRPPHPTEPVRIGIVGASGYGGVQLVRLLSEHPGVQITYLAGQDSAGKRYGDLYPQLAQAVDLTVQPVEVDRIAAN SDVVFLSLPNGLAAELAPPLLAKGCKVLDLSADYRFRNLATYQSWYRMGQTDPNWPSPAYRQANEQAVYGLPELYREAIA QAQLVGCPGCYPTASLLAVAPLLRQGLVELDSLIFDAKSGVSGAGRTPKVGSLFAEVDGSLAAYGVAQHRHTPEIEQACT DLTHTPITVQFTPHLVPMVRGIHVTLYATLRDPGFVGEDLLTIYNAFYRQSPWVKVLPRGVYPQTKWVSGTNTCMIGVEV DSRTNRVIVLSVIDNLMKGQAGQAVQCLNLMMGWPETLGLPRLAFYP
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790396, Length=348, Percent_Identity=39.367816091954, Blast_Score=211, Evalue=6e-56, Organism=Saccharomyces cerevisiae, GI6320913, Length=367, Percent_Identity=29.1553133514986, Blast_Score=132, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.38 [H]
Molecular weight: Translated: 39955; Mature: 39824
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS01224 ARGC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANMAPRPPHPTEPVRIGIVGASGYGGVQLVRLLSEHPGVQITYLAGQDSAGKRYGDLYP CCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHH QLAQAVDLTVQPVEVDRIAANSDVVFLSLPNGLAAELAPPLLAKGCKVLDLSADYRFRNL HHHHHHCCEECEEEHHEEECCCCEEEEECCCCCHHHHCCHHHHCCCEEEECCCCCCHHHH ATYQSWYRMGQTDPNWPSPAYRQANEQAVYGLPELYREAIAQAQLVGCPGCYPTASLLAV HHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHH APLLRQGLVELDSLIFDAKSGVSGAGRTPKVGSLFAEVDGSLAAYGVAQHRHTPEIEQAC HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHH TDLTHTPITVQFTPHLVPMVRGIHVTLYATLRDPGFVGEDLLTIYNAFYRQSPWVKVLPR HHCCCCCEEEEECCCHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEECCC GVYPQTKWVSGTNTCMIGVEVDSRTNRVIVLSVIDNLMKGQAGQAVQCLNLMMGWPETLG CCCCCCEEECCCCEEEEEEEECCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHCCHHHCC LPRLAFYP CCCEECCC >Mature Secondary Structure ANMAPRPPHPTEPVRIGIVGASGYGGVQLVRLLSEHPGVQITYLAGQDSAGKRYGDLYP CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHH QLAQAVDLTVQPVEVDRIAANSDVVFLSLPNGLAAELAPPLLAKGCKVLDLSADYRFRNL HHHHHHCCEECEEEHHEEECCCCEEEEECCCCCHHHHCCHHHHCCCEEEECCCCCCHHHH ATYQSWYRMGQTDPNWPSPAYRQANEQAVYGLPELYREAIAQAQLVGCPGCYPTASLLAV HHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHH APLLRQGLVELDSLIFDAKSGVSGAGRTPKVGSLFAEVDGSLAAYGVAQHRHTPEIEQAC HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHH TDLTHTPITVQFTPHLVPMVRGIHVTLYATLRDPGFVGEDLLTIYNAFYRQSPWVKVLPR HHCCCCCEEEEECCCHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEECCC GVYPQTKWVSGTNTCMIGVEVDSRTNRVIVLSVIDNLMKGQAGQAVQCLNLMMGWPETLG CCCCCCEEECCCCEEEEEEEECCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHCCHHHCC LPRLAFYP CCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA