| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607749
Identifier: 86607749
GI number: 86607749
Start: 265343
End: 267475
Strand: Direct
Name: 86607749
Synonym: CYB_0250
Alternate gene names: NA
Gene position: 265343-267475 (Clockwise)
Preceding gene: 86607748
Following gene: 86607750
Centisome position: 8.71
GC content: 60.95
Gene sequence:
>2133_bases ATGCCTGGTGCCATTCGGTATTTGATGTGCCCACCCGATCACTACGAGGTGGACTATGTGATCAACCCCTGGATGGTGGG GAATGTTCACCGCTCTTCGCGAGAACGGGCGCTGCAGCAGTGGCAGGCTCTTTATCGGCATCTCTCGCAGCGGGCGGAGG TGAAGCTAATCCAGCCGGTGCCGGGATGGCCGGATATGGTGTTTACGGCGAATGCTGGGCTCATCCTGGGATCCAAGGTG GTGCTGAGCCGTTTTTATCACCCAGAGCGGCAGGGGGAACAGCCCCATTTCAAGGCTTGGTTTGAGGAACAGGGCTACAC CGTCTATGAGCTGCCGCCGGCCCTGGCTTTTGAGGGGGCGGGAGATGCTCTGTTGGATCGGGCAGGGCGCTGGCTGTGGG CGGGCTACGGCTTTCGCTCCATGTTGGAGTCTCACCCCTACTTGGCCAAGTGGCTGGGGATCGAGGTGTTGTCTTTGCGG CTGGTGGACGAGCGGTTCTACCACCTAGACACCTGCTTTTGCCCCCTCTCCGAAGGCTATTTGCTTTACTATCCACCGGC TTTTGATGCCTATTCCAACCGTTTGATCGAGATGCGGGTGCCCCCTGAAAAGCGGATCCCGGTTCAGGAGGCGGATGCCA TTCACTTTGCCTGCAATGCCGTGGATGTGAACGGCACGATCTTGGTGAATCGGGTCAGCCCAGAGCTGGAAGCCACCCTA CAGGAGCGGGGATTTGCGGTGGTGCAGACGGAGCTGACGGAGTTCCTGAAAGCCGGTGGGGCGGCCAAGTGCCTGACGCT GCGCCTCGACGAGACGGTGGCTCCCCAAACCGATCCGGTGGCCACGGTGCTCAGCCGGACGGTGACCCTCCAGGGACACT TGGTGGACAGCGACCTGCTCACCAGAGCCGTCGATTGCATTGTCGACAATGGCGGCAGCTTCCAGATCCTCAAGTTTCAG CTTGGGGAAAAACGGCAGAGCACTTCCACGGTGGAACTGGCCGTTTCCGCTCCCACCGAAGAGACCCTGGATACTATTCT CAGCGCCTTGATCGAGCAGGGGGCCCGTCTCTCGGAAGAAACCCAGCAAGATGCCCGTCTGGAGCGGGTAGAGAAAGCAG GGGTAGCGCCCGACGATTTTTATGTCACCACCATCTATCCCACGCAGGTGCGGGTGGCCGGCCAGTGGATCCCGGTGCAG CGGCAGCGCATGGATGGGGTGATCGTGGTCAAGGGATCCGATTGCAATGGCAAGACGGAGTTTTCAGCCTATTGCACCCT GATTCGAGATTTGCAGGTGGGGGATGCCGTGGTGTGTGGGGTGGAAGGGATCCGCACCGTGCGCCAGGCCAGCAAAGAGC GCTCTTCCCAGGAGTTCACCTTTATGGGATCGGGGGTCTCCAGCGAGCGGCGGGTGGAGATCCTGGTGGAGCAGATTGCC TGGGAGCTGCGGCAAATCAAGGAGCGGGGCGGCAAAACGGTGGTGGTGGCAGGGCCGGTGGTCATCCACACGGGCGGTGG ATCCCACTTGGCTACCCTGATTCGGGAGGGCTATGTGCAGGCGCTGCTGGGGGGCAATGCCATTGCCGTTCACGATTTGG AGCAGAATCTCTACGGCACCTCGCTGGGGGTGGATCTGTCGCGGGGCACCCCGGTCAAGGGCGGCCACAAGCATCACCTC AAAACCATCAACCTCATCCGCAAGTATGGCAGTATCCGAGCTGCGGTGGAAGCGGGCGTGATTACCGGCGGGGTGTTCTA CGAGTGTATTCGCGCTCAGGTGCCCTTCTCCCTGGCGGGATCCATCCGTGACGATGGGCCGCTGCCGGATACGGAGATGG ATTTGATCAAGGCCCAGCAGGATTACGCGCGGCTGCTACAGGGGGCCGACATGGTGTTGATGCTCTCCAGCATGTTGCAC TCCATTGGAGCCGGGAACATGACGCCTGCCGGGGTCAAGCTGATCTGCGTGGACATTAACCCGGCAGTGGTGACCAAGCT GGCCGATCGGGGATCCCTGGAGTCGGTGGGGATTGTTACCGATGTGGGCCTGTTCTTGAGTTTGTTGGTGCAGCAGTTGG CGCGTTTGGGGCAGGTGTATGAGCGCCCGCAACCTGCTCTTGCTGCCCGCTAG
Upstream 100 bases:
>100_bases AGATTCCCACAAATAATGATTCTTTCATGATTCTTGAGGATGCTGCTCACGCAACTGCTAATCTAGGGGATGCCCTGCTG CAGATTGCGCTCTGAGATCT
Downstream 100 bases:
>100_bases CCACCCCATCCATAAGCGCTGTTATCTTTTGGGATCCTTAAACTGGGATCCTCAAGCCTCAAAAGGGTATGCCTTTTATT AGCCTGTTGACGGATTTTGG
Product: amidinotransferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 710; Mature: 709
Protein sequence:
>710_residues MPGAIRYLMCPPDHYEVDYVINPWMVGNVHRSSRERALQQWQALYRHLSQRAEVKLIQPVPGWPDMVFTANAGLILGSKV VLSRFYHPERQGEQPHFKAWFEEQGYTVYELPPALAFEGAGDALLDRAGRWLWAGYGFRSMLESHPYLAKWLGIEVLSLR LVDERFYHLDTCFCPLSEGYLLYYPPAFDAYSNRLIEMRVPPEKRIPVQEADAIHFACNAVDVNGTILVNRVSPELEATL QERGFAVVQTELTEFLKAGGAAKCLTLRLDETVAPQTDPVATVLSRTVTLQGHLVDSDLLTRAVDCIVDNGGSFQILKFQ LGEKRQSTSTVELAVSAPTEETLDTILSALIEQGARLSEETQQDARLERVEKAGVAPDDFYVTTIYPTQVRVAGQWIPVQ RQRMDGVIVVKGSDCNGKTEFSAYCTLIRDLQVGDAVVCGVEGIRTVRQASKERSSQEFTFMGSGVSSERRVEILVEQIA WELRQIKERGGKTVVVAGPVVIHTGGGSHLATLIREGYVQALLGGNAIAVHDLEQNLYGTSLGVDLSRGTPVKGGHKHHL KTINLIRKYGSIRAAVEAGVITGGVFYECIRAQVPFSLAGSIRDDGPLPDTEMDLIKAQQDYARLLQGADMVLMLSSMLH SIGAGNMTPAGVKLICVDINPAVVTKLADRGSLESVGIVTDVGLFLSLLVQQLARLGQVYERPQPALAAR
Sequences:
>Translated_710_residues MPGAIRYLMCPPDHYEVDYVINPWMVGNVHRSSRERALQQWQALYRHLSQRAEVKLIQPVPGWPDMVFTANAGLILGSKV VLSRFYHPERQGEQPHFKAWFEEQGYTVYELPPALAFEGAGDALLDRAGRWLWAGYGFRSMLESHPYLAKWLGIEVLSLR LVDERFYHLDTCFCPLSEGYLLYYPPAFDAYSNRLIEMRVPPEKRIPVQEADAIHFACNAVDVNGTILVNRVSPELEATL QERGFAVVQTELTEFLKAGGAAKCLTLRLDETVAPQTDPVATVLSRTVTLQGHLVDSDLLTRAVDCIVDNGGSFQILKFQ LGEKRQSTSTVELAVSAPTEETLDTILSALIEQGARLSEETQQDARLERVEKAGVAPDDFYVTTIYPTQVRVAGQWIPVQ RQRMDGVIVVKGSDCNGKTEFSAYCTLIRDLQVGDAVVCGVEGIRTVRQASKERSSQEFTFMGSGVSSERRVEILVEQIA WELRQIKERGGKTVVVAGPVVIHTGGGSHLATLIREGYVQALLGGNAIAVHDLEQNLYGTSLGVDLSRGTPVKGGHKHHL KTINLIRKYGSIRAAVEAGVITGGVFYECIRAQVPFSLAGSIRDDGPLPDTEMDLIKAQQDYARLLQGADMVLMLSSMLH SIGAGNMTPAGVKLICVDINPAVVTKLADRGSLESVGIVTDVGLFLSLLVQQLARLGQVYERPQPALAAR >Mature_709_residues PGAIRYLMCPPDHYEVDYVINPWMVGNVHRSSRERALQQWQALYRHLSQRAEVKLIQPVPGWPDMVFTANAGLILGSKVV LSRFYHPERQGEQPHFKAWFEEQGYTVYELPPALAFEGAGDALLDRAGRWLWAGYGFRSMLESHPYLAKWLGIEVLSLRL VDERFYHLDTCFCPLSEGYLLYYPPAFDAYSNRLIEMRVPPEKRIPVQEADAIHFACNAVDVNGTILVNRVSPELEATLQ ERGFAVVQTELTEFLKAGGAAKCLTLRLDETVAPQTDPVATVLSRTVTLQGHLVDSDLLTRAVDCIVDNGGSFQILKFQL GEKRQSTSTVELAVSAPTEETLDTILSALIEQGARLSEETQQDARLERVEKAGVAPDDFYVTTIYPTQVRVAGQWIPVQR QRMDGVIVVKGSDCNGKTEFSAYCTLIRDLQVGDAVVCGVEGIRTVRQASKERSSQEFTFMGSGVSSERRVEILVEQIAW ELRQIKERGGKTVVVAGPVVIHTGGGSHLATLIREGYVQALLGGNAIAVHDLEQNLYGTSLGVDLSRGTPVKGGHKHHLK TINLIRKYGSIRAAVEAGVITGGVFYECIRAQVPFSLAGSIRDDGPLPDTEMDLIKAQQDYARLLQGADMVLMLSSMLHS IGAGNMTPAGVKLICVDINPAVVTKLADRGSLESVGIVTDVGLFLSLLVQQLARLGQVYERPQPALAAR
Specific function: Unknown
COG id: COG1915
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI71998636, Length=267, Percent_Identity=40.0749063670412, Blast_Score=192, Evalue=7e-49, Organism=Caenorhabditis elegans, GI17540300, Length=280, Percent_Identity=39.6428571428571, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI25147433, Length=277, Percent_Identity=39.3501805054152, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI71998638, Length=101, Percent_Identity=42.5742574257426, Blast_Score=89, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005239 - InterPro: IPR007545 [H]
Pfam domain/function: PF04455 Saccharop_dh_N [H]
EC number: NA
Molecular weight: Translated: 78167; Mature: 78035
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGAIRYLMCPPDHYEVDYVINPWMVGNVHRSSRERALQQWQALYRHLSQRAEVKLIQPV CCCCEEEEECCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECC PGWPDMVFTANAGLILGSKVVLSRFYHPERQGEQPHFKAWFEEQGYTVYELPPALAFEGA CCCCCEEEEECCCEEECHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEECCCCCEECCC GDALLDRAGRWLWAGYGFRSMLESHPYLAKWLGIEVLSLRLVDERFYHLDTCFCPLSEGY CHHHHHHCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCE LLYYPPAFDAYSNRLIEMRVPPEKRIPVQEADAIHFACNAVDVNGTILVNRVSPELEATL EEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCHHHHHH QERGFAVVQTELTEFLKAGGAAKCLTLRLDETVAPQTDPVATVLSRTVTLQGHLVDSDLL HHCCCEEEHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHEEEEEEEEECHHHH TRAVDCIVDNGGSFQILKFQLGEKRQSTSTVELAVSAPTEETLDTILSALIEQGARLSEE HHHHHHHEECCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHH TQQDARLERVEKAGVAPDDFYVTTIYPTQVRVAGQWIPVQRQRMDGVIVVKGSDCNGKTE HHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEECCCCCCHHHCCCCEEEEECCCCCCCCH FSAYCTLIRDLQVGDAVVCGVEGIRTVRQASKERSSQEFTFMGSGVSSERRVEILVEQIA HHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH WELRQIKERGGKTVVVAGPVVIHTGGGSHLATLIREGYVQALLGGNAIAVHDLEQNLYGT HHHHHHHHCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCC SLGVDLSRGTPVKGGHKHHLKTINLIRKYGSIRAAVEAGVITGGVFYECIRAQVPFSLAG CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHCCCHHHCC SIRDDGPLPDTEMDLIKAQQDYARLLQGADMVLMLSSMLHSIGAGNMTPAGVKLICVDIN CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECC PAVVTKLADRGSLESVGIVTDVGLFLSLLVQQLARLGQVYERPQPALAAR HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PGAIRYLMCPPDHYEVDYVINPWMVGNVHRSSRERALQQWQALYRHLSQRAEVKLIQPV CCCEEEEECCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECC PGWPDMVFTANAGLILGSKVVLSRFYHPERQGEQPHFKAWFEEQGYTVYELPPALAFEGA CCCCCEEEEECCCEEECHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEECCCCCEECCC GDALLDRAGRWLWAGYGFRSMLESHPYLAKWLGIEVLSLRLVDERFYHLDTCFCPLSEGY CHHHHHHCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCE LLYYPPAFDAYSNRLIEMRVPPEKRIPVQEADAIHFACNAVDVNGTILVNRVSPELEATL EEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCHHHHHH QERGFAVVQTELTEFLKAGGAAKCLTLRLDETVAPQTDPVATVLSRTVTLQGHLVDSDLL HHCCCEEEHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHEEEEEEEEECHHHH TRAVDCIVDNGGSFQILKFQLGEKRQSTSTVELAVSAPTEETLDTILSALIEQGARLSEE HHHHHHHEECCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHH TQQDARLERVEKAGVAPDDFYVTTIYPTQVRVAGQWIPVQRQRMDGVIVVKGSDCNGKTE HHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEECCCCCCHHHCCCCEEEEECCCCCCCCH FSAYCTLIRDLQVGDAVVCGVEGIRTVRQASKERSSQEFTFMGSGVSSERRVEILVEQIA HHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH WELRQIKERGGKTVVVAGPVVIHTGGGSHLATLIREGYVQALLGGNAIAVHDLEQNLYGT HHHHHHHHCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCC SLGVDLSRGTPVKGGHKHHLKTINLIRKYGSIRAAVEAGVITGGVFYECIRAQVPFSLAG CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHCCCHHHCC SIRDDGPLPDTEMDLIKAQQDYARLLQGADMVLMLSSMLHSIGAGNMTPAGVKLICVDIN CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECC PAVVTKLADRGSLESVGIVTDVGLFLSLLVQQLARLGQVYERPQPALAAR HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]