Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607749

Identifier: 86607749

GI number: 86607749

Start: 265343

End: 267475

Strand: Direct

Name: 86607749

Synonym: CYB_0250

Alternate gene names: NA

Gene position: 265343-267475 (Clockwise)

Preceding gene: 86607748

Following gene: 86607750

Centisome position: 8.71

GC content: 60.95

Gene sequence:

>2133_bases
ATGCCTGGTGCCATTCGGTATTTGATGTGCCCACCCGATCACTACGAGGTGGACTATGTGATCAACCCCTGGATGGTGGG
GAATGTTCACCGCTCTTCGCGAGAACGGGCGCTGCAGCAGTGGCAGGCTCTTTATCGGCATCTCTCGCAGCGGGCGGAGG
TGAAGCTAATCCAGCCGGTGCCGGGATGGCCGGATATGGTGTTTACGGCGAATGCTGGGCTCATCCTGGGATCCAAGGTG
GTGCTGAGCCGTTTTTATCACCCAGAGCGGCAGGGGGAACAGCCCCATTTCAAGGCTTGGTTTGAGGAACAGGGCTACAC
CGTCTATGAGCTGCCGCCGGCCCTGGCTTTTGAGGGGGCGGGAGATGCTCTGTTGGATCGGGCAGGGCGCTGGCTGTGGG
CGGGCTACGGCTTTCGCTCCATGTTGGAGTCTCACCCCTACTTGGCCAAGTGGCTGGGGATCGAGGTGTTGTCTTTGCGG
CTGGTGGACGAGCGGTTCTACCACCTAGACACCTGCTTTTGCCCCCTCTCCGAAGGCTATTTGCTTTACTATCCACCGGC
TTTTGATGCCTATTCCAACCGTTTGATCGAGATGCGGGTGCCCCCTGAAAAGCGGATCCCGGTTCAGGAGGCGGATGCCA
TTCACTTTGCCTGCAATGCCGTGGATGTGAACGGCACGATCTTGGTGAATCGGGTCAGCCCAGAGCTGGAAGCCACCCTA
CAGGAGCGGGGATTTGCGGTGGTGCAGACGGAGCTGACGGAGTTCCTGAAAGCCGGTGGGGCGGCCAAGTGCCTGACGCT
GCGCCTCGACGAGACGGTGGCTCCCCAAACCGATCCGGTGGCCACGGTGCTCAGCCGGACGGTGACCCTCCAGGGACACT
TGGTGGACAGCGACCTGCTCACCAGAGCCGTCGATTGCATTGTCGACAATGGCGGCAGCTTCCAGATCCTCAAGTTTCAG
CTTGGGGAAAAACGGCAGAGCACTTCCACGGTGGAACTGGCCGTTTCCGCTCCCACCGAAGAGACCCTGGATACTATTCT
CAGCGCCTTGATCGAGCAGGGGGCCCGTCTCTCGGAAGAAACCCAGCAAGATGCCCGTCTGGAGCGGGTAGAGAAAGCAG
GGGTAGCGCCCGACGATTTTTATGTCACCACCATCTATCCCACGCAGGTGCGGGTGGCCGGCCAGTGGATCCCGGTGCAG
CGGCAGCGCATGGATGGGGTGATCGTGGTCAAGGGATCCGATTGCAATGGCAAGACGGAGTTTTCAGCCTATTGCACCCT
GATTCGAGATTTGCAGGTGGGGGATGCCGTGGTGTGTGGGGTGGAAGGGATCCGCACCGTGCGCCAGGCCAGCAAAGAGC
GCTCTTCCCAGGAGTTCACCTTTATGGGATCGGGGGTCTCCAGCGAGCGGCGGGTGGAGATCCTGGTGGAGCAGATTGCC
TGGGAGCTGCGGCAAATCAAGGAGCGGGGCGGCAAAACGGTGGTGGTGGCAGGGCCGGTGGTCATCCACACGGGCGGTGG
ATCCCACTTGGCTACCCTGATTCGGGAGGGCTATGTGCAGGCGCTGCTGGGGGGCAATGCCATTGCCGTTCACGATTTGG
AGCAGAATCTCTACGGCACCTCGCTGGGGGTGGATCTGTCGCGGGGCACCCCGGTCAAGGGCGGCCACAAGCATCACCTC
AAAACCATCAACCTCATCCGCAAGTATGGCAGTATCCGAGCTGCGGTGGAAGCGGGCGTGATTACCGGCGGGGTGTTCTA
CGAGTGTATTCGCGCTCAGGTGCCCTTCTCCCTGGCGGGATCCATCCGTGACGATGGGCCGCTGCCGGATACGGAGATGG
ATTTGATCAAGGCCCAGCAGGATTACGCGCGGCTGCTACAGGGGGCCGACATGGTGTTGATGCTCTCCAGCATGTTGCAC
TCCATTGGAGCCGGGAACATGACGCCTGCCGGGGTCAAGCTGATCTGCGTGGACATTAACCCGGCAGTGGTGACCAAGCT
GGCCGATCGGGGATCCCTGGAGTCGGTGGGGATTGTTACCGATGTGGGCCTGTTCTTGAGTTTGTTGGTGCAGCAGTTGG
CGCGTTTGGGGCAGGTGTATGAGCGCCCGCAACCTGCTCTTGCTGCCCGCTAG

Upstream 100 bases:

>100_bases
AGATTCCCACAAATAATGATTCTTTCATGATTCTTGAGGATGCTGCTCACGCAACTGCTAATCTAGGGGATGCCCTGCTG
CAGATTGCGCTCTGAGATCT

Downstream 100 bases:

>100_bases
CCACCCCATCCATAAGCGCTGTTATCTTTTGGGATCCTTAAACTGGGATCCTCAAGCCTCAAAAGGGTATGCCTTTTATT
AGCCTGTTGACGGATTTTGG

Product: amidinotransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 710; Mature: 709

Protein sequence:

>710_residues
MPGAIRYLMCPPDHYEVDYVINPWMVGNVHRSSRERALQQWQALYRHLSQRAEVKLIQPVPGWPDMVFTANAGLILGSKV
VLSRFYHPERQGEQPHFKAWFEEQGYTVYELPPALAFEGAGDALLDRAGRWLWAGYGFRSMLESHPYLAKWLGIEVLSLR
LVDERFYHLDTCFCPLSEGYLLYYPPAFDAYSNRLIEMRVPPEKRIPVQEADAIHFACNAVDVNGTILVNRVSPELEATL
QERGFAVVQTELTEFLKAGGAAKCLTLRLDETVAPQTDPVATVLSRTVTLQGHLVDSDLLTRAVDCIVDNGGSFQILKFQ
LGEKRQSTSTVELAVSAPTEETLDTILSALIEQGARLSEETQQDARLERVEKAGVAPDDFYVTTIYPTQVRVAGQWIPVQ
RQRMDGVIVVKGSDCNGKTEFSAYCTLIRDLQVGDAVVCGVEGIRTVRQASKERSSQEFTFMGSGVSSERRVEILVEQIA
WELRQIKERGGKTVVVAGPVVIHTGGGSHLATLIREGYVQALLGGNAIAVHDLEQNLYGTSLGVDLSRGTPVKGGHKHHL
KTINLIRKYGSIRAAVEAGVITGGVFYECIRAQVPFSLAGSIRDDGPLPDTEMDLIKAQQDYARLLQGADMVLMLSSMLH
SIGAGNMTPAGVKLICVDINPAVVTKLADRGSLESVGIVTDVGLFLSLLVQQLARLGQVYERPQPALAAR

Sequences:

>Translated_710_residues
MPGAIRYLMCPPDHYEVDYVINPWMVGNVHRSSRERALQQWQALYRHLSQRAEVKLIQPVPGWPDMVFTANAGLILGSKV
VLSRFYHPERQGEQPHFKAWFEEQGYTVYELPPALAFEGAGDALLDRAGRWLWAGYGFRSMLESHPYLAKWLGIEVLSLR
LVDERFYHLDTCFCPLSEGYLLYYPPAFDAYSNRLIEMRVPPEKRIPVQEADAIHFACNAVDVNGTILVNRVSPELEATL
QERGFAVVQTELTEFLKAGGAAKCLTLRLDETVAPQTDPVATVLSRTVTLQGHLVDSDLLTRAVDCIVDNGGSFQILKFQ
LGEKRQSTSTVELAVSAPTEETLDTILSALIEQGARLSEETQQDARLERVEKAGVAPDDFYVTTIYPTQVRVAGQWIPVQ
RQRMDGVIVVKGSDCNGKTEFSAYCTLIRDLQVGDAVVCGVEGIRTVRQASKERSSQEFTFMGSGVSSERRVEILVEQIA
WELRQIKERGGKTVVVAGPVVIHTGGGSHLATLIREGYVQALLGGNAIAVHDLEQNLYGTSLGVDLSRGTPVKGGHKHHL
KTINLIRKYGSIRAAVEAGVITGGVFYECIRAQVPFSLAGSIRDDGPLPDTEMDLIKAQQDYARLLQGADMVLMLSSMLH
SIGAGNMTPAGVKLICVDINPAVVTKLADRGSLESVGIVTDVGLFLSLLVQQLARLGQVYERPQPALAAR
>Mature_709_residues
PGAIRYLMCPPDHYEVDYVINPWMVGNVHRSSRERALQQWQALYRHLSQRAEVKLIQPVPGWPDMVFTANAGLILGSKVV
LSRFYHPERQGEQPHFKAWFEEQGYTVYELPPALAFEGAGDALLDRAGRWLWAGYGFRSMLESHPYLAKWLGIEVLSLRL
VDERFYHLDTCFCPLSEGYLLYYPPAFDAYSNRLIEMRVPPEKRIPVQEADAIHFACNAVDVNGTILVNRVSPELEATLQ
ERGFAVVQTELTEFLKAGGAAKCLTLRLDETVAPQTDPVATVLSRTVTLQGHLVDSDLLTRAVDCIVDNGGSFQILKFQL
GEKRQSTSTVELAVSAPTEETLDTILSALIEQGARLSEETQQDARLERVEKAGVAPDDFYVTTIYPTQVRVAGQWIPVQR
QRMDGVIVVKGSDCNGKTEFSAYCTLIRDLQVGDAVVCGVEGIRTVRQASKERSSQEFTFMGSGVSSERRVEILVEQIAW
ELRQIKERGGKTVVVAGPVVIHTGGGSHLATLIREGYVQALLGGNAIAVHDLEQNLYGTSLGVDLSRGTPVKGGHKHHLK
TINLIRKYGSIRAAVEAGVITGGVFYECIRAQVPFSLAGSIRDDGPLPDTEMDLIKAQQDYARLLQGADMVLMLSSMLHS
IGAGNMTPAGVKLICVDINPAVVTKLADRGSLESVGIVTDVGLFLSLLVQQLARLGQVYERPQPALAAR

Specific function: Unknown

COG id: COG1915

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71998636, Length=267, Percent_Identity=40.0749063670412, Blast_Score=192, Evalue=7e-49,
Organism=Caenorhabditis elegans, GI17540300, Length=280, Percent_Identity=39.6428571428571, Blast_Score=189, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI25147433, Length=277, Percent_Identity=39.3501805054152, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI71998638, Length=101, Percent_Identity=42.5742574257426, Blast_Score=89, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005239
- InterPro:   IPR007545 [H]

Pfam domain/function: PF04455 Saccharop_dh_N [H]

EC number: NA

Molecular weight: Translated: 78167; Mature: 78035

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGAIRYLMCPPDHYEVDYVINPWMVGNVHRSSRERALQQWQALYRHLSQRAEVKLIQPV
CCCCEEEEECCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
PGWPDMVFTANAGLILGSKVVLSRFYHPERQGEQPHFKAWFEEQGYTVYELPPALAFEGA
CCCCCEEEEECCCEEECHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEECCCCCEECCC
GDALLDRAGRWLWAGYGFRSMLESHPYLAKWLGIEVLSLRLVDERFYHLDTCFCPLSEGY
CHHHHHHCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCE
LLYYPPAFDAYSNRLIEMRVPPEKRIPVQEADAIHFACNAVDVNGTILVNRVSPELEATL
EEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCHHHHHH
QERGFAVVQTELTEFLKAGGAAKCLTLRLDETVAPQTDPVATVLSRTVTLQGHLVDSDLL
HHCCCEEEHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHEEEEEEEEECHHHH
TRAVDCIVDNGGSFQILKFQLGEKRQSTSTVELAVSAPTEETLDTILSALIEQGARLSEE
HHHHHHHEECCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHH
TQQDARLERVEKAGVAPDDFYVTTIYPTQVRVAGQWIPVQRQRMDGVIVVKGSDCNGKTE
HHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEECCCCCCHHHCCCCEEEEECCCCCCCCH
FSAYCTLIRDLQVGDAVVCGVEGIRTVRQASKERSSQEFTFMGSGVSSERRVEILVEQIA
HHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH
WELRQIKERGGKTVVVAGPVVIHTGGGSHLATLIREGYVQALLGGNAIAVHDLEQNLYGT
HHHHHHHHCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCC
SLGVDLSRGTPVKGGHKHHLKTINLIRKYGSIRAAVEAGVITGGVFYECIRAQVPFSLAG
CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHCCCHHHCC
SIRDDGPLPDTEMDLIKAQQDYARLLQGADMVLMLSSMLHSIGAGNMTPAGVKLICVDIN
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
PAVVTKLADRGSLESVGIVTDVGLFLSLLVQQLARLGQVYERPQPALAAR
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PGAIRYLMCPPDHYEVDYVINPWMVGNVHRSSRERALQQWQALYRHLSQRAEVKLIQPV
CCCEEEEECCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
PGWPDMVFTANAGLILGSKVVLSRFYHPERQGEQPHFKAWFEEQGYTVYELPPALAFEGA
CCCCCEEEEECCCEEECHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEECCCCCEECCC
GDALLDRAGRWLWAGYGFRSMLESHPYLAKWLGIEVLSLRLVDERFYHLDTCFCPLSEGY
CHHHHHHCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCE
LLYYPPAFDAYSNRLIEMRVPPEKRIPVQEADAIHFACNAVDVNGTILVNRVSPELEATL
EEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCHHHHHH
QERGFAVVQTELTEFLKAGGAAKCLTLRLDETVAPQTDPVATVLSRTVTLQGHLVDSDLL
HHCCCEEEHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHEEEEEEEEECHHHH
TRAVDCIVDNGGSFQILKFQLGEKRQSTSTVELAVSAPTEETLDTILSALIEQGARLSEE
HHHHHHHEECCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHH
TQQDARLERVEKAGVAPDDFYVTTIYPTQVRVAGQWIPVQRQRMDGVIVVKGSDCNGKTE
HHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEECCCCCCHHHCCCCEEEEECCCCCCCCH
FSAYCTLIRDLQVGDAVVCGVEGIRTVRQASKERSSQEFTFMGSGVSSERRVEILVEQIA
HHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH
WELRQIKERGGKTVVVAGPVVIHTGGGSHLATLIREGYVQALLGGNAIAVHDLEQNLYGT
HHHHHHHHCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCC
SLGVDLSRGTPVKGGHKHHLKTINLIRKYGSIRAAVEAGVITGGVFYECIRAQVPFSLAG
CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHCCCHHHCC
SIRDDGPLPDTEMDLIKAQQDYARLLQGADMVLMLSSMLHSIGAGNMTPAGVKLICVDIN
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
PAVVTKLADRGSLESVGIVTDVGLFLSLLVQQLARLGQVYERPQPALAAR
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]