| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is cysT [H]
Identifier: 86607736
GI number: 86607736
Start: 246059
End: 246871
Strand: Reverse
Name: cysT [H]
Synonym: CYB_0237
Alternate gene names: 86607736
Gene position: 246871-246059 (Counterclockwise)
Preceding gene: 86607737
Following gene: 86607735
Centisome position: 8.1
GC content: 60.02
Gene sequence:
>813_bases TTGCTGCAAGCTTTGTCTCAACTGTCTTGGCCGTGGCGGCTGACCCTGGGCTATCTCTTCTTGATGTTGATTCTGCCGCT GGCTGCCTTGATTGCCAAGTCCAGCAGCGTGGGCTGGGCGGAGTTTTGGCGGATCGCGACGGATCCCGTGGCCCTCTCCG CCTATGAAGTTACTTTTGTAACCGCGTTGCTGGCGGCTCTGATCAACGGCGTGATGGGCACCCTGACTGCCTGGGTGCTG GTGCGCTACGCCTTCCCCGGCAAAAAGCTTCTCGAGGGGTTGATCGATCTGCCGTTTGCTTTGCCCACCGCCGTGGCCGG CCTCACCCTGGCAACGGTTTACAGCAGCAACGGCTGGATTGGATCCCTTTTGGCCCCCTTGGGGATCCGCATCTCCTTTA CCCGCTTGGGGGTGGGGGTGGCGATGCTGTTTATTTCTTTTCCCTTTGTGGTGCGGACGGTGCAGCCGGTGTTGCAGGAG CTGGAGAAAGATGTGGAAGAGGCAGCCTGGAGTTTGGGGGCTTCCCGCTTTCAGACCTTCCGGCGCGTGGTGCTGCCCCA GATTCTGCCGGCAGTGCTCACCGGGGTGGCCCTGGGGTTTTCCCGCGCCGTGGGGGAATACGGCTCTGTGGTGATCATCG CTTCCAGCATTCCCTTTCGGGACTTGATCGCGGCGGTGCTGGTGATTCAGCGGCTGGAACAACACGACTATGCTGGGGCA ACCGTGATCGGAACGGTGATGTTGGGGATCTCTTTCCTGTCGCTGGTGGTAATTAACCTTCTGCAAGCCTGGGGAAGTCG CCATGAAACCTGA
Upstream 100 bases:
>100_bases GCAGGTGGGGCAGCAGGTCTATGTGCGCCCCAAGGTGGTGAAAGCCTTTCCCGTCAAAAAAACCGAGATGACCGCAATGC CGGTGGGAGCTTGAGAAACG
Downstream 100 bases:
>100_bases CGAGGTAGCAGGTGTCAAACCGAAGCCCTCAACATGGCTGTCGGGCCTGTTGATCGGGATCGTCGGGCTTTACATCGCGC TGCTGCTCGGGATCCCGGTG
Product: sulfate ABC transporter, permease protein CysT
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MLQALSQLSWPWRLTLGYLFLMLILPLAALIAKSSSVGWAEFWRIATDPVALSAYEVTFVTALLAALINGVMGTLTAWVL VRYAFPGKKLLEGLIDLPFALPTAVAGLTLATVYSSNGWIGSLLAPLGIRISFTRLGVGVAMLFISFPFVVRTVQPVLQE LEKDVEEAAWSLGASRFQTFRRVVLPQILPAVLTGVALGFSRAVGEYGSVVIIASSIPFRDLIAAVLVIQRLEQHDYAGA TVIGTVMLGISFLSLVVINLLQAWGSRHET
Sequences:
>Translated_270_residues MLQALSQLSWPWRLTLGYLFLMLILPLAALIAKSSSVGWAEFWRIATDPVALSAYEVTFVTALLAALINGVMGTLTAWVL VRYAFPGKKLLEGLIDLPFALPTAVAGLTLATVYSSNGWIGSLLAPLGIRISFTRLGVGVAMLFISFPFVVRTVQPVLQE LEKDVEEAAWSLGASRFQTFRRVVLPQILPAVLTGVALGFSRAVGEYGSVVIIASSIPFRDLIAAVLVIQRLEQHDYAGA TVIGTVMLGISFLSLVVINLLQAWGSRHET >Mature_270_residues MLQALSQLSWPWRLTLGYLFLMLILPLAALIAKSSSVGWAEFWRIATDPVALSAYEVTFVTALLAALINGVMGTLTAWVL VRYAFPGKKLLEGLIDLPFALPTAVAGLTLATVYSSNGWIGSLLAPLGIRISFTRLGVGVAMLFISFPFVVRTVQPVLQE LEKDVEEAAWSLGASRFQTFRRVVLPQILPAVLTGVALGFSRAVGEYGSVVIIASSIPFRDLIAAVLVIQRLEQHDYAGA TVIGTVMLGISFLSLVVINLLQAWGSRHET
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=234, Percent_Identity=49.5726495726496, Blast_Score=235, Evalue=2e-63, Organism=Escherichia coli, GI87082099, Length=242, Percent_Identity=36.3636363636364, Blast_Score=134, Evalue=5e-33, Organism=Escherichia coli, GI1786980, Length=175, Percent_Identity=36.5714285714286, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1787369, Length=214, Percent_Identity=28.5046728971963, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787368, Length=155, Percent_Identity=30.9677419354839, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29200; Mature: 29200
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQALSQLSWPWRLTLGYLFLMLILPLAALIAKSSSVGWAEFWRIATDPVALSAYEVTFV CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHH TALLAALINGVMGTLTAWVLVRYAFPGKKLLEGLIDLPFALPTAVAGLTLATVYSSNGWI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCH GSLLAPLGIRISFTRLGVGVAMLFISFPFVVRTVQPVLQELEKDVEEAAWSLGASRFQTF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRVVLPQILPAVLTGVALGFSRAVGEYGSVVIIASSIPFRDLIAAVLVIQRLEQHDYAGA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCH TVIGTVMLGISFLSLVVINLLQAWGSRHET HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLQALSQLSWPWRLTLGYLFLMLILPLAALIAKSSSVGWAEFWRIATDPVALSAYEVTFV CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHH TALLAALINGVMGTLTAWVLVRYAFPGKKLLEGLIDLPFALPTAVAGLTLATVYSSNGWI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCH GSLLAPLGIRISFTRLGVGVAMLFISFPFVVRTVQPVLQELEKDVEEAAWSLGASRFQTF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRVVLPQILPAVLTGVALGFSRAVGEYGSVVIIASSIPFRDLIAAVLVIQRLEQHDYAGA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCH TVIGTVMLGISFLSLVVINLLQAWGSRHET HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231; 8425067 [H]