| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is dnaJ [H]
Identifier: 86607651
GI number: 86607651
Start: 165341
End: 165757
Strand: Direct
Name: dnaJ [H]
Synonym: CYB_0149
Alternate gene names: 86607651
Gene position: 165341-165757 (Clockwise)
Preceding gene: 86607650
Following gene: 86607652
Centisome position: 5.43
GC content: 59.95
Gene sequence:
>417_bases ATGCGCTCCTTGACTTCCCTCACCTACTACCAACGGCTGGGTCTGTCTCCAGGGGCATCTCCTGAGGCCATCCGGCGGGC TTATCGGCAGTTGAGCAAACGCTACCATCCCGATACTTCTCCCCTGGCCCCGGAAGTGGCCATTCGCTGCTTTCAAGAGT TGCAGGAGGCCTACCTTGTCCTCAGCAACCCGACGAAACGGGCCATCTACGATGCCAGCTTACGGGCGGTGACTGCCAAC ACGGGATCTCTGAGCATGACGGGATCCCTTGGTGCCGATTCTCTAGAGCTGCGTATGGAAACCCGCCCACTTTCGGCTGG CGAGCTGTGTGCCCTGCTGCTGATGGGATCCACCCTGGTTGTGTGTTTGGTGTTGGCAGGTGTCCTCGCTTGGCTGCGAG AGAGTGGGGCAAGCTGA
Upstream 100 bases:
>100_bases AGGGATCCCGGTGTCTGCGCGAGTGATTACACTGGACTAGAGCTGTGCTCCCCTGAAAGCGGTTTTGCTGCCCCTGTAGT CTTGCTCCTCCATAGGTTGC
Downstream 100 bases:
>100_bases TTCTGCGAGCATTTCCTGCCCTCTTCGGTAGGACATTGGGATCGAGTTTTCGGATTCTGGATCAGGAGTGCTTGAATGAA CATAGCCCGTTGACTCTAGG
Product: DnaJ domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MRSLTSLTYYQRLGLSPGASPEAIRRAYRQLSKRYHPDTSPLAPEVAIRCFQELQEAYLVLSNPTKRAIYDASLRAVTAN TGSLSMTGSLGADSLELRMETRPLSAGELCALLLMGSTLVVCLVLAGVLAWLRESGAS
Sequences:
>Translated_138_residues MRSLTSLTYYQRLGLSPGASPEAIRRAYRQLSKRYHPDTSPLAPEVAIRCFQELQEAYLVLSNPTKRAIYDASLRAVTAN TGSLSMTGSLGADSLELRMETRPLSAGELCALLLMGSTLVVCLVLAGVLAWLRESGAS >Mature_138_residues MRSLTSLTYYQRLGLSPGASPEAIRRAYRQLSKRYHPDTSPLAPEVAIRCFQELQEAYLVLSNPTKRAIYDASLRAVTAN TGSLSMTGSLGADSLELRMETRPLSAGELCALLLMGSTLVVCLVLAGVLAWLRESGAS
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI21553335, Length=65, Percent_Identity=50.7692307692308, Blast_Score=73, Evalue=7e-14, Organism=Homo sapiens, GI4885495, Length=65, Percent_Identity=49.2307692307692, Blast_Score=73, Evalue=9e-14, Organism=Homo sapiens, GI17388799, Length=65, Percent_Identity=49.2307692307692, Blast_Score=71, Evalue=4e-13, Organism=Homo sapiens, GI23503241, Length=64, Percent_Identity=48.4375, Blast_Score=70, Evalue=5e-13, Organism=Homo sapiens, GI194328760, Length=68, Percent_Identity=45.5882352941176, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI194328758, Length=63, Percent_Identity=49.2063492063492, Blast_Score=68, Evalue=2e-12, Organism=Homo sapiens, GI5031741, Length=71, Percent_Identity=45.0704225352113, Blast_Score=68, Evalue=3e-12, Organism=Homo sapiens, GI5453690, Length=65, Percent_Identity=55.3846153846154, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI45552813, Length=70, Percent_Identity=48.5714285714286, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI45549272, Length=70, Percent_Identity=48.5714285714286, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552811, Length=70, Percent_Identity=48.5714285714286, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]
EC number: NA
Molecular weight: Translated: 14934; Mature: 14934
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLTSLTYYQRLGLSPGASPEAIRRAYRQLSKRYHPDTSPLAPEVAIRCFQELQEAYLV CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LSNPTKRAIYDASLRAVTANTGSLSMTGSLGADSLELRMETRPLSAGELCALLLMGSTLV HCCCCHHHHHHHHHHEEECCCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH VCLVLAGVLAWLRESGAS HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRSLTSLTYYQRLGLSPGASPEAIRRAYRQLSKRYHPDTSPLAPEVAIRCFQELQEAYLV CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LSNPTKRAIYDASLRAVTANTGSLSMTGSLGADSLELRMETRPLSAGELCALLLMGSTLV HCCCCHHHHHHHHHHEEECCCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH VCLVLAGVLAWLRESGAS HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA