| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607630
Identifier: 86607630
GI number: 86607630
Start: 141133
End: 141891
Strand: Direct
Name: 86607630
Synonym: CYB_0128
Alternate gene names: NA
Gene position: 141133-141891 (Clockwise)
Preceding gene: 86607629
Following gene: 86607631
Centisome position: 4.63
GC content: 59.16
Gene sequence:
>759_bases ATGGGCGCACGCAAGATTATCTACGGCATTTTTGGGCAACGGGCCGGCAGCGTCATCGTCGGAACTTGGAACTGGCTGTG GGGGATCCCGGTGGAGAAAGGCGGCACAGGAGCGGTGATGGTGGCGGAAGAATCCCTACGCACGATGCAGGAGACGGTTC AGCGTCTCACGGAAGCCGTTGCCACCCAAGTAGCCGCCTATCAGCGGGCTGAGCAGAAGTACATGCAAAAGGTGCGGGAG TACCAGGCCCTGGAGAACAAAGCTCGCCTGGCCGCCCAACGGGGCGATCAAGAGGCTGCCCGCCTGGCTATGTCCCAAGC GCTGCAAATTGAGGCCATTCTCGGCCCCCTTAAGGAGAACGTGGAAACTGCCGAGCGCTACGTCAACGCCGCCAAGCAAA AGCTGGCCCGCGAGAAAGAACGACTGGCCGCTTACAAGAGCGAGCTGAGCAACCTCAAAGACATCAACGAGGTGAACCAA GCTCTGGAGCAGATGACCCGCGTCAACAACTCCTACAACATCGACTCGGCCAAGTCCCAATTTGAGGCGGCAAAGAATGC TATCCAGGCTCGCCAGCTCAAATCCCGAGCCATGAGCGAACTCTCGGAAGATCGCAGCGAGCAGATTGCTGCCCAACTGG ATGAAATGGCCATGGACGACGAAATCTCCCGCCGCTTGGCAATGCTCACCGGCCAAGGAGGTGCCCAGGCCAACTTGCCG ATGCCGGATTTGGATTTCGAGAAGCGGCTCCCCCAATAG
Upstream 100 bases:
>100_bases CGGGGATTTGAATTTGTCCACTTGCCGGATCCCTGAGATCTTTCCAGTCAGGGAGAAAGTTAAATACAGTAGAGGCACGC ACAAGCAGGAGGGTCAGGCC
Downstream 100 bases:
>100_bases CGGCAGTTGCTTCCAAGCTTGGGGATCCCTCGCTTTTCAACCCACGTCGGCAACCCCGCTGCTAAGTTGCAGGGGGAGTT TTCCGTTGGGAATTGACGGT
Product: pspA/IM30 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MGARKIIYGIFGQRAGSVIVGTWNWLWGIPVEKGGTGAVMVAEESLRTMQETVQRLTEAVATQVAAYQRAEQKYMQKVRE YQALENKARLAAQRGDQEAARLAMSQALQIEAILGPLKENVETAERYVNAAKQKLAREKERLAAYKSELSNLKDINEVNQ ALEQMTRVNNSYNIDSAKSQFEAAKNAIQARQLKSRAMSELSEDRSEQIAAQLDEMAMDDEISRRLAMLTGQGGAQANLP MPDLDFEKRLPQ
Sequences:
>Translated_252_residues MGARKIIYGIFGQRAGSVIVGTWNWLWGIPVEKGGTGAVMVAEESLRTMQETVQRLTEAVATQVAAYQRAEQKYMQKVRE YQALENKARLAAQRGDQEAARLAMSQALQIEAILGPLKENVETAERYVNAAKQKLAREKERLAAYKSELSNLKDINEVNQ ALEQMTRVNNSYNIDSAKSQFEAAKNAIQARQLKSRAMSELSEDRSEQIAAQLDEMAMDDEISRRLAMLTGQGGAQANLP MPDLDFEKRLPQ >Mature_251_residues GARKIIYGIFGQRAGSVIVGTWNWLWGIPVEKGGTGAVMVAEESLRTMQETVQRLTEAVATQVAAYQRAEQKYMQKVREY QALENKARLAAQRGDQEAARLAMSQALQIEAILGPLKENVETAERYVNAAKQKLAREKERLAAYKSELSNLKDINEVNQA LEQMTRVNNSYNIDSAKSQFEAAKNAIQARQLKSRAMSELSEDRSEQIAAQLDEMAMDDEISRRLAMLTGQGGAQANLPM PDLDFEKRLPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28166; Mature: 28035
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGARKIIYGIFGQRAGSVIVGTWNWLWGIPVEKGGTGAVMVAEESLRTMQETVQRLTEAV CCCHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH ATQVAAYQRAEQKYMQKVREYQALENKARLAAQRGDQEAARLAMSQALQIEAILGPLKEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VETAERYVNAAKQKLAREKERLAAYKSELSNLKDINEVNQALEQMTRVNNSYNIDSAKSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH FEAAKNAIQARQLKSRAMSELSEDRSEQIAAQLDEMAMDDEISRRLAMLTGQGGAQANLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC MPDLDFEKRLPQ CCCCCHHHCCCC >Mature Secondary Structure GARKIIYGIFGQRAGSVIVGTWNWLWGIPVEKGGTGAVMVAEESLRTMQETVQRLTEAV CCHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH ATQVAAYQRAEQKYMQKVREYQALENKARLAAQRGDQEAARLAMSQALQIEAILGPLKEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VETAERYVNAAKQKLAREKERLAAYKSELSNLKDINEVNQALEQMTRVNNSYNIDSAKSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH FEAAKNAIQARQLKSRAMSELSEDRSEQIAAQLDEMAMDDEISRRLAMLTGQGGAQANLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC MPDLDFEKRLPQ CCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA