Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607535

Identifier: 86607535

GI number: 86607535

Start: 40889

End: 41899

Strand: Direct

Name: 86607535

Synonym: CYB_0033

Alternate gene names: NA

Gene position: 40889-41899 (Clockwise)

Preceding gene: 86607533

Following gene: 86607536

Centisome position: 1.34

GC content: 61.72

Gene sequence:

>1011_bases
GTGCCGATTGCCAGCTTCCTGTGCCGGTTGGATCGCCAGACCCGCAGCTTCACGGGGCCTATTTACGCCGAACAGCCCCA
GGTTGCCACCTGCAACCCCGGTCGCCTTACGCCTGCAGCAGCCCAAAAGATGATGGATCGGCTGAATTTTCTACGGCTGT
TGCACCAGTTACCGCCGGTGAAGCTCAATCCTCAGTTCCTAGAAGCCGCCCAGCAAGCGGCCTTGATGCAGGTAGCCAAT
GGTACTCTCAGCCACCAGCCGCCCCCTTCTTGGCGCTGCTTTACCCCTGCTGGGGAGGCGGGATCCCGCTTCAGCAACCT
GGCGGTTGGGCCCATCCTAGAGCTGAACGGCCCCGATCCAGGCCGGGTGTTGGCGCGGCAGGTGGACATCTATTTTGCCG
AGCCAGGTCGAGAAAACTTTGTGGATGTGGGGCATCGCCGCTGGAACCTGTATCCTCAGTACGCCCAGGGGGCCTACGGC
ATTGTCTTTGACCCACGGGCTGGACGGGTGACCCAGGCCAACGCCAACTGGATCTTCGGTTTTGACGAGTCGGTGCCAGA
TCCAGAGTTCATCGCCTTCCCGGAGAAAGACGGCTACCTCTACCGCCTAGAAGGGTTTTCCGGCCAGCCCCTGTCTGCCT
ACCGCTGGTCTTTCTCGGTGCCCAGCCGTGGCGGCAAGGCTGATCTCAGCCAAGCCCAAGTCCGCATCACCGATGCCCTC
AGCGGCGAGCCGGTGCCTGTTGGAGATCTCCGCGTGGGGGATCCCGCCTTTGGCCTGGAAACTTTGACCTACTCCGTGGG
TTCGATCCAGCCCAATCGCAACTACACCTTTGAAATTAGCGGCATTCGCCTCAACGGTGGCCCCCCCCGCAGTTACCGCT
ACACCACCGCTCTCTACGACTGCGATCCCCAAACTTCCCAACGGCCCGCACCCCTCACCGAAGGGCTGGGGATCCCGCCC
CGTCTGCTCTGGCAGAGGGAGCCTTTCAACTCTTTCAACCCTCTCAACTAG

Upstream 100 bases:

>100_bases
TCAGCTTTGGGCTTTGAGGATCGTGGGGATCTTTTGTCTTTGTCTGCTGGCGGCCTGTGGAGGATCCCCTACCTCGATGG
AGCCACCGCGGGCAGGGGAA

Downstream 100 bases:

>100_bases
CTTTTCCTCACCCCCAGCCCCTTTCCCAAAGGGGAGAGAGGAGTCTGCTGCTCCTGGAAGCTTGACTTTATGCATAAAGC
GCAATTCGAGAATGACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: SCP Family Protein; Secreted Protein

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MPIASFLCRLDRQTRSFTGPIYAEQPQVATCNPGRLTPAAAQKMMDRLNFLRLLHQLPPVKLNPQFLEAAQQAALMQVAN
GTLSHQPPPSWRCFTPAGEAGSRFSNLAVGPILELNGPDPGRVLARQVDIYFAEPGRENFVDVGHRRWNLYPQYAQGAYG
IVFDPRAGRVTQANANWIFGFDESVPDPEFIAFPEKDGYLYRLEGFSGQPLSAYRWSFSVPSRGGKADLSQAQVRITDAL
SGEPVPVGDLRVGDPAFGLETLTYSVGSIQPNRNYTFEISGIRLNGGPPRSYRYTTALYDCDPQTSQRPAPLTEGLGIPP
RLLWQREPFNSFNPLN

Sequences:

>Translated_336_residues
MPIASFLCRLDRQTRSFTGPIYAEQPQVATCNPGRLTPAAAQKMMDRLNFLRLLHQLPPVKLNPQFLEAAQQAALMQVAN
GTLSHQPPPSWRCFTPAGEAGSRFSNLAVGPILELNGPDPGRVLARQVDIYFAEPGRENFVDVGHRRWNLYPQYAQGAYG
IVFDPRAGRVTQANANWIFGFDESVPDPEFIAFPEKDGYLYRLEGFSGQPLSAYRWSFSVPSRGGKADLSQAQVRITDAL
SGEPVPVGDLRVGDPAFGLETLTYSVGSIQPNRNYTFEISGIRLNGGPPRSYRYTTALYDCDPQTSQRPAPLTEGLGIPP
RLLWQREPFNSFNPLN
>Mature_335_residues
PIASFLCRLDRQTRSFTGPIYAEQPQVATCNPGRLTPAAAQKMMDRLNFLRLLHQLPPVKLNPQFLEAAQQAALMQVANG
TLSHQPPPSWRCFTPAGEAGSRFSNLAVGPILELNGPDPGRVLARQVDIYFAEPGRENFVDVGHRRWNLYPQYAQGAYGI
VFDPRAGRVTQANANWIFGFDESVPDPEFIAFPEKDGYLYRLEGFSGQPLSAYRWSFSVPSRGGKADLSQAQVRITDALS
GEPVPVGDLRVGDPAFGLETLTYSVGSIQPNRNYTFEISGIRLNGGPPRSYRYTTALYDCDPQTSQRPAPLTEGLGIPPR
LLWQREPFNSFNPLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37259; Mature: 37128

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIASFLCRLDRQTRSFTGPIYAEQPQVATCNPGRLTPAAAQKMMDRLNFLRLLHQLPPV
CCHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
KLNPQFLEAAQQAALMQVANGTLSHQPPPSWRCFTPAGEAGSRFSNLAVGPILELNGPDP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHCEEECCEEECCCCCH
GRVLARQVDIYFAEPGRENFVDVGHRRWNLYPQYAQGAYGIVFDPRAGRVTQANANWIFG
HHEEEEEEEEEEECCCCCCHHHCCCEEECCCHHHCCCCEEEEECCCCCEEEECCCCEEEE
FDESVPDPEFIAFPEKDGYLYRLEGFSGQPLSAYRWSFSVPSRGGKADLSQAQVRITDAL
CCCCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECC
SGEPVPVGDLRVGDPAFGLETLTYSVGSIQPNRNYTFEISGIRLNGGPPRSYRYTTALYD
CCCCCCCCCEEECCCCCCHHHEEEHHCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEE
CDPQTSQRPAPLTEGLGIPPRLLWQREPFNSFNPLN
CCCCCCCCCCCHHCCCCCCHHHHEECCCCCCCCCCC
>Mature Secondary Structure 
PIASFLCRLDRQTRSFTGPIYAEQPQVATCNPGRLTPAAAQKMMDRLNFLRLLHQLPPV
CHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
KLNPQFLEAAQQAALMQVANGTLSHQPPPSWRCFTPAGEAGSRFSNLAVGPILELNGPDP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHCEEECCEEECCCCCH
GRVLARQVDIYFAEPGRENFVDVGHRRWNLYPQYAQGAYGIVFDPRAGRVTQANANWIFG
HHEEEEEEEEEEECCCCCCHHHCCCEEECCCHHHCCCCEEEEECCCCCEEEECCCCEEEE
FDESVPDPEFIAFPEKDGYLYRLEGFSGQPLSAYRWSFSVPSRGGKADLSQAQVRITDAL
CCCCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECC
SGEPVPVGDLRVGDPAFGLETLTYSVGSIQPNRNYTFEISGIRLNGGPPRSYRYTTALYD
CCCCCCCCCEEECCCCCCHHHEEEHHCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEE
CDPQTSQRPAPLTEGLGIPPRLLWQREPFNSFNPLN
CCCCCCCCCCCHHCCCCCCHHHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA