Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607510

Identifier: 86607510

GI number: 86607510

Start: 6533

End: 7120

Strand: Direct

Name: 86607510

Synonym: CYB_0007

Alternate gene names: NA

Gene position: 6533-7120 (Clockwise)

Preceding gene: 86607509

Following gene: 86607515

Centisome position: 0.21

GC content: 59.86

Gene sequence:

>588_bases
GTGAAGTACTTCTGCAGGCGAGTTGGCCGAGGTCGATCTCTCTCCCCGGAAGAGCGTTGGGTTGTTACTGAGGTTCGATT
GGCTCAATTGCTCAGGGCAGCGGAAGCCAACTTGCGGGCCAATTCTGAGTTGCGCCAACAGCAGCAGGAGCAGCAAAAGC
AACTGGAAGCCGAGCGCCGCCACAGCGAAGCCCTAAGAGACTCGACCGCCGATTTGCGCACCAGCGTGATGGAGCTGCGG
GAAGGACAGGCCCTTTGGCAGAGCCATGTGGAAGAGCTGCGCTCTTGTCTGCGGGAGCTGCTCAAGGAACAAAGCGAACT
GGTGCAGATTGTTGCCCAGCAGCAGCACATCCTGAAGGATTGTCAGGAAGTCATCCGCGCCATGCTGGAGCAAATGCGAG
ATGACCACCGAGACTTCCGCTCTGCCATCAGCATTTTGCTGGAGGAGCTGCACCAAACCGTGCGCTGTTTGGTTATCAGG
TCAGGTGGCACCCTACCCAAGCCCGTTCGCCATCCCGAAGTGCCGGAGACGGATCCCGGCTCCCCGCCGACCGATTCGGC
CTCGCCTGGGGAAGGCTCTTCGTCCTAG

Upstream 100 bases:

>100_bases
AAACAGCCGGGACAAAGCCCGATAGACAGGTCTCTGCTTGGGCTGAAGTCCTATGGTGCTTTGATTTAAAGTAGAGAGTT
GTGTATAGGGTGCAGCGACT

Downstream 100 bases:

>100_bases
GGATCTTCTGCTCCCCCAAGAGCTATCCCACATCGCCTTCCGGCAGCCACTGCGGCCAGAACAGGCGCAACTCCCTGACC
CGCTCCCCTTTGACCAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKYFCRRVGRGRSLSPEERWVVTEVRLAQLLRAAEANLRANSELRQQQQEQQKQLEAERRHSEALRDSTADLRTSVMELR
EGQALWQSHVEELRSCLRELLKEQSELVQIVAQQQHILKDCQEVIRAMLEQMRDDHRDFRSAISILLEELHQTVRCLVIR
SGGTLPKPVRHPEVPETDPGSPPTDSASPGEGSSS

Sequences:

>Translated_195_residues
MKYFCRRVGRGRSLSPEERWVVTEVRLAQLLRAAEANLRANSELRQQQQEQQKQLEAERRHSEALRDSTADLRTSVMELR
EGQALWQSHVEELRSCLRELLKEQSELVQIVAQQQHILKDCQEVIRAMLEQMRDDHRDFRSAISILLEELHQTVRCLVIR
SGGTLPKPVRHPEVPETDPGSPPTDSASPGEGSSS
>Mature_195_residues
MKYFCRRVGRGRSLSPEERWVVTEVRLAQLLRAAEANLRANSELRQQQQEQQKQLEAERRHSEALRDSTADLRTSVMELR
EGQALWQSHVEELRSCLRELLKEQSELVQIVAQQQHILKDCQEVIRAMLEQMRDDHRDFRSAISILLEELHQTVRCLVIR
SGGTLPKPVRHPEVPETDPGSPPTDSASPGEGSSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22367; Mature: 22367

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYFCRRVGRGRSLSPEERWVVTEVRLAQLLRAAEANLRANSELRQQQQEQQKQLEAERR
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
HSEALRDSTADLRTSVMELREGQALWQSHVEELRSCLRELLKEQSELVQIVAQQQHILKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CQEVIRAMLEQMRDDHRDFRSAISILLEELHQTVRCLVIRSGGTLPKPVRHPEVPETDPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
SPPTDSASPGEGSSS
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MKYFCRRVGRGRSLSPEERWVVTEVRLAQLLRAAEANLRANSELRQQQQEQQKQLEAERR
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
HSEALRDSTADLRTSVMELREGQALWQSHVEELRSCLRELLKEQSELVQIVAQQQHILKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CQEVIRAMLEQMRDDHRDFRSAISILLEELHQTVRCLVIRSGGTLPKPVRHPEVPETDPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
SPPTDSASPGEGSSS
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA