| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is murI
Identifier: 86606820
GI number: 86606820
Start: 2196566
End: 2197444
Strand: Reverse
Name: murI
Synonym: CYA_2180
Alternate gene names: 86606820
Gene position: 2197444-2196566 (Counterclockwise)
Preceding gene: 86606821
Following gene: 86606819
Centisome position: 74.93
GC content: 65.98
Gene sequence:
>879_bases ATGCGTTGGGAGTGGGGATCAGATCCGGATCCCAGTTGGCCAATTGGGGTGTTTGACAGTGGCTTGGGCGGGCTCACCGT CTGGCGGGCCCTGCGCCGTCGCTTGCCCCAGGAGCGCCTTGTCTACTTTGCCGACACGGCGCGGCTGCCCTATGGGGATC GCTCCGCCGAGGAGATCTTGACTTTTGTGCGGCAGATCCTCCGCTGGATGCAGGCGCAGCCGGTGAAGGTGGTGGTGATG GCCTGCAACACCAGCTCGGCGCTGGCCCTGGAGCAGGTGCAGCAGGAGTTTGCCCTGCCCATTCTGGGGCTGATCCTGCC CGGCGCCCAGGCGGCCCTGGCCCAGGGATCCCGCATTGGGGTCATTGCCACGGCAGCCACGGTCAAAAGCCGCGCCTACT CCAAGGCCATTCAAGAGTACAGCGCTCTGGATCCCCGGCGCTTTCCCCAACCTGTCCAGTGCTGGGAGCAGGCCTGCCCG GAGTTCGTCCCCCTCATCGAAGCCGGCCAGTTGGACGGCCCCGAGCTGCGCCAAGCGGCTGAACGCTATTTGCAGCCGCT CCTGCAACAGGGGATCGACACCCTCGTCTACGGCTGCACCCACTACCCGCTGCTGGATCCTCTCCTGAAGTCCTTGCTGC CCTCTTCGGTCAGACGGGTGGATCCCGGCGTGGCGCTGGTGGGATCCCTGGCCCGGGAACTCAGCCTCTGGGGCCTGCGC CGACCCTCAACTGCTAGCCAGGCAGAACCTCACCGCTTCTATGTGAGTGGGGATCCGGAGCGGTTTGCCCAGTTGGCCAC TCCTTGGCTGGGCTTTCGACCCCAGGTGGAACGGGTGGAATGGCCGGCCTTGGACGTCAACAACTCCCGCCGGCCCTAG
Upstream 100 bases:
>100_bases GTGAAGGGACGAAGTCCCAGGGTAGGGAAGCTGTCGCCGAGACTCTCGGAAGCAGGGTAGGATACAGCAGCTTCAGCCAA GGTGTTGAGGAGAACGGAGC
Downstream 100 bases:
>100_bases GCGAGAGCAGCAGGCCAGCCCAGGCAAATTGGCCCTACTTGCCCCCCTGTTGCTGCAGCGATCCCACAGGTTCCCTGCCT GCAGCCAGGTCGACACGGAG
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MRWEWGSDPDPSWPIGVFDSGLGGLTVWRALRRRLPQERLVYFADTARLPYGDRSAEEILTFVRQILRWMQAQPVKVVVM ACNTSSALALEQVQQEFALPILGLILPGAQAALAQGSRIGVIATAATVKSRAYSKAIQEYSALDPRRFPQPVQCWEQACP EFVPLIEAGQLDGPELRQAAERYLQPLLQQGIDTLVYGCTHYPLLDPLLKSLLPSSVRRVDPGVALVGSLARELSLWGLR RPSTASQAEPHRFYVSGDPERFAQLATPWLGFRPQVERVEWPALDVNNSRRP
Sequences:
>Translated_292_residues MRWEWGSDPDPSWPIGVFDSGLGGLTVWRALRRRLPQERLVYFADTARLPYGDRSAEEILTFVRQILRWMQAQPVKVVVM ACNTSSALALEQVQQEFALPILGLILPGAQAALAQGSRIGVIATAATVKSRAYSKAIQEYSALDPRRFPQPVQCWEQACP EFVPLIEAGQLDGPELRQAAERYLQPLLQQGIDTLVYGCTHYPLLDPLLKSLLPSSVRRVDPGVALVGSLARELSLWGLR RPSTASQAEPHRFYVSGDPERFAQLATPWLGFRPQVERVEWPALDVNNSRRP >Mature_292_residues MRWEWGSDPDPSWPIGVFDSGLGGLTVWRALRRRLPQERLVYFADTARLPYGDRSAEEILTFVRQILRWMQAQPVKVVVM ACNTSSALALEQVQQEFALPILGLILPGAQAALAQGSRIGVIATAATVKSRAYSKAIQEYSALDPRRFPQPVQCWEQACP EFVPLIEAGQLDGPELRQAAERYLQPLLQQGIDTLVYGCTHYPLLDPLLKSLLPSSVRRVDPGVALVGSLARELSLWGLR RPSTASQAEPHRFYVSGDPERFAQLATPWLGFRPQVERVEWPALDVNNSRRP
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=226, Percent_Identity=35.3982300884956, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 32650; Mature: 32650
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWEWGSDPDPSWPIGVFDSGLGGLTVWRALRRRLPQERLVYFADTARLPYGDRSAEEIL CCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCHHHEEEHHHCCCCCCCCCCHHHHH TFVRQILRWMQAQPVKVVVMACNTSSALALEQVQQEFALPILGLILPGAQAALAQGSRIG HHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEE VIATAATVKSRAYSKAIQEYSALDPRRFPQPVQCWEQACPEFVPLIEAGQLDGPELRQAA EEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCHHHHHHH ERYLQPLLQQGIDTLVYGCTHYPLLDPLLKSLLPSSVRRVDPGVALVGSLARELSLWGLR HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC RPSTASQAEPHRFYVSGDPERFAQLATPWLGFRPQVERVEWPALDVNNSRRP CCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRWEWGSDPDPSWPIGVFDSGLGGLTVWRALRRRLPQERLVYFADTARLPYGDRSAEEIL CCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCHHHEEEHHHCCCCCCCCCCHHHHH TFVRQILRWMQAQPVKVVVMACNTSSALALEQVQQEFALPILGLILPGAQAALAQGSRIG HHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEE VIATAATVKSRAYSKAIQEYSALDPRRFPQPVQCWEQACPEFVPLIEAGQLDGPELRQAA EEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCHHHHHHH ERYLQPLLQQGIDTLVYGCTHYPLLDPLLKSLLPSSVRRVDPGVALVGSLARELSLWGLR HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC RPSTASQAEPHRFYVSGDPERFAQLATPWLGFRPQVERVEWPALDVNNSRRP CCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA