Click here to switch to the map view.

The map label for this gene is ydfK [H]

Identifier: 86606813

GI number: 86606813

Start: 2189855

End: 2190574

Strand: Reverse

Name: ydfK [H]

Synonym: CYA_2173

Alternate gene names: 86606813

Gene position: 2190574-2189855 (Counterclockwise)

Preceding gene: 86606816

Following gene: 86606809

Centisome position: 74.69

GC content: 65.97

Gene sequence:

>720_bases
ATGGCTCCTCCCGGCACCGGCACCCTTGTCAATGCCCTCGCGATCCTAGTGGGCAGCGGCCTCGGTTGGGCGGCGGGCCG
TCGCCTGCCCGAACGCATAAGCCAAACCCTGTTGCAAGCCCTGGGATCCCTGGTGTTGGTCTTGGGGATCCAGATGGCTC
TCACCCTCAGCAGCGCTGCCCAGGCGGTAACGGTTTTGCTGGCCCTGATCGGGGGGGCTTTGCTGGGGGAAGGGATCGAC
CTCGAGGCCGCCTTTGAGCGGCTGGGACAGGGCCTGGAAAAGCGGGTGAGCCCCTGGCTGGGCCCCAGCCCTATCGCCCG
CGCCTTCGTGACCACCACCATCCTGTTTGTGGTCGGCCCCATGACTCTGCTGGGAGCTATCCAGGATGGCCTGGGGGATC
CCTCGCTGCTCTTGGTCAAGGCCGCCTTGGATGGCATTGCCACCCTTGCCTTTACGGCCAGCCTCGGCTGGGGCACGCTG
TTTTCCGCCCTGCCGGTGCTCTTGGTTCAGGGAGGCGTGGCCCTGCTGGCGCGGCAACTGCAGCCGCTGTTGCGCCCAGA
CCTGCTCGCCGCCTTGGAAGCCACTGGCGGGATCCTCATCCTGGGTATTGGCATTAACCTGCTCGGCCTGGCCCGCCTGC
GGGTGGCCAACCTGCTGCCCGCTTTGGTGATTGTGGAGCTGCTGGTGGGATTTTTCCCCCTCTGGGATCTCGACTTCTAG

Upstream 100 bases:

>100_bases
GAAATGGTGCATCTGCCCAGGTGTTTCCGCGCAGGCTTGGGACGAACCTTATATCCGAGACTGAGAAATAATCGAGAAAG
CTTAGCTCTGGGCACGTTGT

Downstream 100 bases:

>100_bases
GGAACTGGAGGGGGCTCTCGCCCTGGGGGAGAAGGGAACCCAGCACAAGAGCGTCTGGAACCTCCCTCTCTATCCTCTAA
GCCCTACCCTGACCGCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MAPPGTGTLVNALAILVGSGLGWAAGRRLPERISQTLLQALGSLVLVLGIQMALTLSSAAQAVTVLLALIGGALLGEGID
LEAAFERLGQGLEKRVSPWLGPSPIARAFVTTTILFVVGPMTLLGAIQDGLGDPSLLLVKAALDGIATLAFTASLGWGTL
FSALPVLLVQGGVALLARQLQPLLRPDLLAALEATGGILILGIGINLLGLARLRVANLLPALVIVELLVGFFPLWDLDF

Sequences:

>Translated_239_residues
MAPPGTGTLVNALAILVGSGLGWAAGRRLPERISQTLLQALGSLVLVLGIQMALTLSSAAQAVTVLLALIGGALLGEGID
LEAAFERLGQGLEKRVSPWLGPSPIARAFVTTTILFVVGPMTLLGAIQDGLGDPSLLLVKAALDGIATLAFTASLGWGTL
FSALPVLLVQGGVALLARQLQPLLRPDLLAALEATGGILILGIGINLLGLARLRVANLLPALVIVELLVGFFPLWDLDF
>Mature_238_residues
APPGTGTLVNALAILVGSGLGWAAGRRLPERISQTLLQALGSLVLVLGIQMALTLSSAAQAVTVLLALIGGALLGEGIDL
EAAFERLGQGLEKRVSPWLGPSPIARAFVTTTILFVVGPMTLLGAIQDGLGDPSLLLVKAALDGIATLAFTASLGWGTLF
SALPVLLVQGGVALLARQLQPLLRPDLLAALEATGGILILGIGINLLGLARLRVANLLPALVIVELLVGFFPLWDLDF

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=215, Percent_Identity=31.1627906976744, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 24539; Mature: 24408

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPPGTGTLVNALAILVGSGLGWAAGRRLPERISQTLLQALGSLVLVLGIQMALTLSSAA
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAVTVLLALIGGALLGEGIDLEAAFERLGQGLEKRVSPWLGPSPIARAFVTTTILFVVGP
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
MTLLGAIQDGLGDPSLLLVKAALDGIATLAFTASLGWGTLFSALPVLLVQGGVALLARQL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH
QPLLRPDLLAALEATGGILILGIGINLLGLARLRVANLLPALVIVELLVGFFPLWDLDF
HHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
APPGTGTLVNALAILVGSGLGWAAGRRLPERISQTLLQALGSLVLVLGIQMALTLSSAA
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAVTVLLALIGGALLGEGIDLEAAFERLGQGLEKRVSPWLGPSPIARAFVTTTILFVVGP
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
MTLLGAIQDGLGDPSLLLVKAALDGIATLAFTASLGWGTLFSALPVLLVQGGVALLARQL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH
QPLLRPDLLAALEATGGILILGIGINLLGLARLRVANLLPALVIVELLVGFFPLWDLDF
HHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]