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The map label for this gene is tonB2 [H]

Identifier: 86606670

GI number: 86606670

Start: 2045348

End: 2046667

Strand: Reverse

Name: tonB2 [H]

Synonym: CYA_2030

Alternate gene names: 86606670

Gene position: 2046667-2045348 (Counterclockwise)

Preceding gene: 86606671

Following gene: 86606669

Centisome position: 69.79

GC content: 68.11

Gene sequence:

>1320_bases
ATGCTCGCCGAACCCCCCACTCACACCAACCGGGGATCCGCTTCTTCGGGGAGGGGATCCCACCCTCGGCTTTTGTGGCG
CCTGCAGATGGGGTATTGGCAGCAGGCAGGCATGGCCTACGGGGTGGGTCTGGCCTGGCTGGAGCTGGGGCTGTGGGCAA
TGGGGCGGCGCCAAAGATCTGGAGGACTGCGTTGGATCGGCTGGGGGGAGAAGCTACTTAGGGAGGCGCTGCTGGCGGGC
TATTGCTCCCTTGCCCTCTCAGTTGCCTGCGCCTCGCTGGAGGATCTCCCTGAGTTGCCTGGGCAAAGTCGGGAGCCCCG
CCCGCTGCGCTGGGAGACTTTGCTCTCGCTGCTTCTGCATCTGCTGGGGCTGCTGGGATGGGTTGGGTGGGGATTTCGAC
CTCTGCTGGAGCCCGAAGTGCGGATCCCGGTCACGCTGTGGCTGGAGGATCCGCTGCCGCCGCAGCTTGCGGCAGAGGCA
GATTCGGCCTTGCCCAAGCCGGCAGGGGAGCCGAGCGACCCGGCCCCGGAATCACCTCCCGCGGATAACCCACCCCCACC
GGCTCCTGCGCCTCAGGAGAGAGTAGAGACCACGGCCGTTCCCAAGTCTGAGCTGGCTTTGCAAACGCCGCCCCCCACCC
CTACGCCTGTTCCCACAGCAAAGCCGGAGCCGACCCCTCCACCCACGCCGATGGCCGCACCAACCCCTCCTCCGCCCTCC
CCAACACCGACGGTCACCCCCTCACCACAGCAGCCCCCTCCAACTCCGGTGGCTACCCCCACGGCTGCACCTGTGGCCGA
CAGGCCGCCCCCCGTGGCTGCTACGAGCGCTCCCATTCCCCGCTTCACCCCCCTCATCCAAGGGATCCGTTCGGGTGGCG
GGGGCACTGCTTCCCCCGGCGGGAGCGAGGGATCTGGATCCAGCGCTCCTGGGACGGGTGGCCTCGGTGGATCCCAAGCG
CAGGGTTCTGCGCCGACAGCGGCAGAAGGGGCCGGGGAGGCATCCTCCCCCACCTCCTCGCCCGCAGCAGTGGCTGCCAG
GCCGGACATCCTGGCCCGCCCCATCCCGGGGCGCAACCCGCCGCCGCAGTACCCTCCCCAAGCCCGCCGCCTCAACCAGC
AGGGGCAAGTGCTGTTGCGGGTCAAGGTGGATGCCCAAGGGCAGGTGCAGCAGGTGGAAATTGTCTCTTCCAGCGGCTTC
CCGGCCCTGGACAGGGCCGCACAAGAGGCGGTGCAACGCTGGCAATTTAGCCCCGCCTTGAGGAACAACACCCCGATTGA
GTCGTGGGTAACGGTGCCGATTCAGTTCACCCTCAATTGA

Upstream 100 bases:

>100_bases
GTGGAGCGGCGGGCCCAGCCGGGGCGCCATGTGGCCCTCAGCTTCTCCAGCCGCTTCTAGGACTCCCCGCCAGCCGTGCC
CATCGAGATAGCCCCGAGCC

Downstream 100 bases:

>100_bases
CTGTTTTGGAACTGTTTTGGAGATCGTCCATGCCGTCTTGTCTTTCTCGCCGTCAACTCCTTGTCTTGGGCCTGGCCAGC
CTGGGGGTTTGGGGAATGGG

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MLAEPPTHTNRGSASSGRGSHPRLLWRLQMGYWQQAGMAYGVGLAWLELGLWAMGRRQRSGGLRWIGWGEKLLREALLAG
YCSLALSVACASLEDLPELPGQSREPRPLRWETLLSLLLHLLGLLGWVGWGFRPLLEPEVRIPVTLWLEDPLPPQLAAEA
DSALPKPAGEPSDPAPESPPADNPPPPAPAPQERVETTAVPKSELALQTPPPTPTPVPTAKPEPTPPPTPMAAPTPPPPS
PTPTVTPSPQQPPPTPVATPTAAPVADRPPPVAATSAPIPRFTPLIQGIRSGGGGTASPGGSEGSGSSAPGTGGLGGSQA
QGSAPTAAEGAGEASSPTSSPAAVAARPDILARPIPGRNPPPQYPPQARRLNQQGQVLLRVKVDAQGQVQQVEIVSSSGF
PALDRAAQEAVQRWQFSPALRNNTPIESWVTVPIQFTLN

Sequences:

>Translated_439_residues
MLAEPPTHTNRGSASSGRGSHPRLLWRLQMGYWQQAGMAYGVGLAWLELGLWAMGRRQRSGGLRWIGWGEKLLREALLAG
YCSLALSVACASLEDLPELPGQSREPRPLRWETLLSLLLHLLGLLGWVGWGFRPLLEPEVRIPVTLWLEDPLPPQLAAEA
DSALPKPAGEPSDPAPESPPADNPPPPAPAPQERVETTAVPKSELALQTPPPTPTPVPTAKPEPTPPPTPMAAPTPPPPS
PTPTVTPSPQQPPPTPVATPTAAPVADRPPPVAATSAPIPRFTPLIQGIRSGGGGTASPGGSEGSGSSAPGTGGLGGSQA
QGSAPTAAEGAGEASSPTSSPAAVAARPDILARPIPGRNPPPQYPPQARRLNQQGQVLLRVKVDAQGQVQQVEIVSSSGF
PALDRAAQEAVQRWQFSPALRNNTPIESWVTVPIQFTLN
>Mature_439_residues
MLAEPPTHTNRGSASSGRGSHPRLLWRLQMGYWQQAGMAYGVGLAWLELGLWAMGRRQRSGGLRWIGWGEKLLREALLAG
YCSLALSVACASLEDLPELPGQSREPRPLRWETLLSLLLHLLGLLGWVGWGFRPLLEPEVRIPVTLWLEDPLPPQLAAEA
DSALPKPAGEPSDPAPESPPADNPPPPAPAPQERVETTAVPKSELALQTPPPTPTPVPTAKPEPTPPPTPMAAPTPPPPS
PTPTVTPSPQQPPPTPVATPTAAPVADRPPPVAATSAPIPRFTPLIQGIRSGGGGTASPGGSEGSGSSAPGTGGLGGSQA
QGSAPTAAEGAGEASSPTSSPAAVAARPDILARPIPGRNPPPQYPPQARRLNQQGQVLLRVKVDAQGQVQQVEIVSSSGF
PALDRAAQEAVQRWQFSPALRNNTPIESWVTVPIQFTLN

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 45860; Mature: 45860

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAEPPTHTNRGSASSGRGSHPRLLWRLQMGYWQQAGMAYGVGLAWLELGLWAMGRRQRS
CCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHC
GGLRWIGWGEKLLREALLAGYCSLALSVACASLEDLPELPGQSREPRPLRWETLLSLLLH
CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LLGLLGWVGWGFRPLLEPEVRIPVTLWLEDPLPPQLAAEADSALPKPAGEPSDPAPESPP
HHHHHHHHHCCCCCCCCCCEECCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
ADNPPPPAPAPQERVETTAVPKSELALQTPPPTPTPVPTAKPEPTPPPTPMAAPTPPPPS
CCCCCCCCCCCHHHHHHHCCCHHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTPTVTPSPQQPPPTPVATPTAAPVADRPPPVAATSAPIPRFTPLIQGIRSGGGGTASPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
GSEGSGSSAPGTGGLGGSQAQGSAPTAAEGAGEASSPTSSPAAVAARPDILARPIPGRNP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHCCCCCCCCC
PPQYPPQARRLNQQGQVLLRVKVDAQGQVQQVEIVSSSGFPALDRAAQEAVQRWQFSPAL
CCCCCHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHH
RNNTPIESWVTVPIQFTLN
CCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MLAEPPTHTNRGSASSGRGSHPRLLWRLQMGYWQQAGMAYGVGLAWLELGLWAMGRRQRS
CCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHC
GGLRWIGWGEKLLREALLAGYCSLALSVACASLEDLPELPGQSREPRPLRWETLLSLLLH
CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LLGLLGWVGWGFRPLLEPEVRIPVTLWLEDPLPPQLAAEADSALPKPAGEPSDPAPESPP
HHHHHHHHHCCCCCCCCCCEECCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
ADNPPPPAPAPQERVETTAVPKSELALQTPPPTPTPVPTAKPEPTPPPTPMAAPTPPPPS
CCCCCCCCCCCHHHHHHHCCCHHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTPTVTPSPQQPPPTPVATPTAAPVADRPPPVAATSAPIPRFTPLIQGIRSGGGGTASPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
GSEGSGSSAPGTGGLGGSQAQGSAPTAAEGAGEASSPTSSPAAVAARPDILARPIPGRNP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHCCCCCCCCC
PPQYPPQARRLNQQGQVLLRVKVDAQGQVQQVEIVSSSGFPALDRAAQEAVQRWQFSPAL
CCCCCHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHH
RNNTPIESWVTVPIQFTLN
CCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10689178; 10984043 [H]