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The map label for this gene is kaiA

Identifier: 86606549

GI number: 86606549

Start: 1912539

End: 1913453

Strand: Reverse

Name: kaiA

Synonym: CYA_1902

Alternate gene names: 86606549

Gene position: 1913453-1912539 (Counterclockwise)

Preceding gene: 86606557

Following gene: 86606548

Centisome position: 65.24

GC content: 60.98

Gene sequence:

>915_bases
TTGTCGCCAGAACGCTTTGTGGCTGAGGTCTTCCAGGATCCGGAAGCCTTTCTGGAGGCTCTGCGAGGGGAGGAAAACCA
TCCGGACTGCCTGGTGCTGCTGGTGGAAGCGACGCGGCTGGACAAGCTGGAGGCGTTGGGCTGTCAGCTTTGCAAGCAGG
GACTGTTGCTGCCGACAGTGGTGGCCATTGTGTCGGAAGAGCTCAAACCGGAAGGCGGCGCCAGCCGCTCCGGCGAAGCG
TCCTCCCCCCCTGTTCCTCCGGGGGCGAGAGCTCTGCTCAAGCGGGAGCGGTTTTTCTACCACAACGCCACTCTGGTTCG
CCTCGTCTCGCCGTCAGAGCTGTTGCCGCCAAAGGGATCCCAGGCCACTCCTTCTGCTTCTCCCTTGGAGCTGCTGATCA
ACCGAGCCATTGCCCTGTTTCTCCAGATTTCCCCCACCTGCAGCCTGCCTGCAGCAAACCCTCACCCCAAGGATCAGCCC
TACCTGCTCTACACGCACCAGCAGCAGCGGCGGCTGGCGGAAAAGCTGCGGGAACGCCTTGGCTACGCCGGCGTGTACTA
CCATCGGGAGCCGGAGCTGTTCTACCGCCACCTGCCCCCCGACGAGCAGCAGGCCCTCATGCGGCGGCTGCGTAACCTTT
ACCAGGCTATTGTCCTGGAGTATTTTCAATCTCCTGAGACCGTCAATGCCCGCATCGACGAGCTGGTGGCCCTTGCCTTT
TTTGCCGACATCGGCGCCGCCCAACTGTTGGAGCTGCACATGAACCTAATGGAGGATTTTGCCAAACAACTAAAACTGGA
GGGTCGCAGCGAAGAGATCCTGCTGGATTACCGCCTCACTCTCATCGACGTGATGGCCCACCTGAGCGAAATGTACCGCC
GCTCCATTCCCAAATCTGCCCCAAGGGATCCCTAG

Upstream 100 bases:

>100_bases
TTTTCTATCCTTATTGAAGCCCGACACCCACCCACTGCACATCAGCCTTTTGCTCGACTGGGAGCCGCCTGCTGGAGAGC
CGCTGGCGGCAGAGGCTTTG

Downstream 100 bases:

>100_bases
GTTATGTCCACTCGCAAAGCCTATGTCCTCAAGCTCTACGTGGCGGGCAATACCCCCAATTCTCTGCGCGCCCTCAGCAC
CTTGCAAGACATTCTGGAAA

Product: circadian clock protein KaiA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSPERFVAEVFQDPEAFLEALRGEENHPDCLVLLVEATRLDKLEALGCQLCKQGLLLPTVVAIVSEELKPEGGASRSGEA
SSPPVPPGARALLKRERFFYHNATLVRLVSPSELLPPKGSQATPSASPLELLINRAIALFLQISPTCSLPAANPHPKDQP
YLLYTHQQQRRLAEKLRERLGYAGVYYHREPELFYRHLPPDEQQALMRRLRNLYQAIVLEYFQSPETVNARIDELVALAF
FADIGAAQLLELHMNLMEDFAKQLKLEGRSEEILLDYRLTLIDVMAHLSEMYRRSIPKSAPRDP

Sequences:

>Translated_304_residues
MSPERFVAEVFQDPEAFLEALRGEENHPDCLVLLVEATRLDKLEALGCQLCKQGLLLPTVVAIVSEELKPEGGASRSGEA
SSPPVPPGARALLKRERFFYHNATLVRLVSPSELLPPKGSQATPSASPLELLINRAIALFLQISPTCSLPAANPHPKDQP
YLLYTHQQQRRLAEKLRERLGYAGVYYHREPELFYRHLPPDEQQALMRRLRNLYQAIVLEYFQSPETVNARIDELVALAF
FADIGAAQLLELHMNLMEDFAKQLKLEGRSEEILLDYRLTLIDVMAHLSEMYRRSIPKSAPRDP
>Mature_303_residues
SPERFVAEVFQDPEAFLEALRGEENHPDCLVLLVEATRLDKLEALGCQLCKQGLLLPTVVAIVSEELKPEGGASRSGEAS
SPPVPPGARALLKRERFFYHNATLVRLVSPSELLPPKGSQATPSASPLELLINRAIALFLQISPTCSLPAANPHPKDQPY
LLYTHQQQRRLAEKLRERLGYAGVYYHREPELFYRHLPPDEQQALMRRLRNLYQAIVLEYFQSPETVNARIDELVALAFF
ADIGAAQLLELHMNLMEDFAKQLKLEGRSEEILLDYRLTLIDVMAHLSEMYRRSIPKSAPRDP

Specific function: Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of c

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 kaiA N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR011648
- InterPro:   IPR020844
- InterPro:   IPR020856
- InterPro:   IPR017944 [H]

Pfam domain/function: PF07688 KaiA [H]

EC number: NA

Molecular weight: Translated: 34372; Mature: 34241

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPERFVAEVFQDPEAFLEALRGEENHPDCLVLLVEATRLDKLEALGCQLCKQGLLLPTV
CCHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHH
VAIVSEELKPEGGASRSGEASSPPVPPGARALLKRERFFYHNATLVRLVSPSELLPPKGS
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCC
QATPSASPLELLINRAIALFLQISPTCSLPAANPHPKDQPYLLYTHQQQRRLAEKLRERL
CCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHH
GYAGVYYHREPELFYRHLPPDEQQALMRRLRNLYQAIVLEYFQSPETVNARIDELVALAF
CCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FADIGAAQLLELHMNLMEDFAKQLKLEGRSEEILLDYRLTLIDVMAHLSEMYRRSIPKSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCC
PRDP
CCCC
>Mature Secondary Structure 
SPERFVAEVFQDPEAFLEALRGEENHPDCLVLLVEATRLDKLEALGCQLCKQGLLLPTV
CHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHH
VAIVSEELKPEGGASRSGEASSPPVPPGARALLKRERFFYHNATLVRLVSPSELLPPKGS
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCC
QATPSASPLELLINRAIALFLQISPTCSLPAANPHPKDQPYLLYTHQQQRRLAEKLRERL
CCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHH
GYAGVYYHREPELFYRHLPPDEQQALMRRLRNLYQAIVLEYFQSPETVNARIDELVALAF
CCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FADIGAAQLLELHMNLMEDFAKQLKLEGRSEEILLDYRLTLIDVMAHLSEMYRRSIPKSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCC
PRDP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA