| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is thiL
Identifier: 86606546
GI number: 86606546
Start: 1909497
End: 1910519
Strand: Reverse
Name: thiL
Synonym: CYA_1899
Alternate gene names: 86606546
Gene position: 1910519-1909497 (Counterclockwise)
Preceding gene: 86606547
Following gene: 86606545
Centisome position: 65.14
GC content: 66.57
Gene sequence:
>1023_bases TTGTTCAGCGATCTTCCCGACTTTTTCCCTCAACCCAAGAGCAGCTCTTCTCCCACGCCCATCTCGGCCATCGGCGAGGC GGGGCTGTTGCAGATCGTGCAGCGCTACTGTCCTGCCCAGGTGGTGGGAGACGACGGGGCGGTGTTGCCCGCTCCTGAGG GGCAGTTGGTGGTGAGCACCGATGTCTTGGTGGAGGGGGTTCACTTTAGCGACGTGACAACCCCGGCCCACGCGGTGGGC TGGCGGGCGGTGGCGGCCAATCTCTCGGATCTGGCAGCGATGGGATCCCGTCCGCGGGCGTTGGTGGTGGGCTTGGGCCT GCCGGGATCCACGCCGGTGGCTTGGGTAGAGGAGCTCTACGAAGGGATGCGGGCCTGCTGTGCCCGTTGGGGAGCAGAAT TGGTGGGGGGGGATCTGTGTCGGTCGCCGCAGCGGTTTGTGGCGATCACGGCCCTGGGATCGGTGCAGCCGGGGCGGGCG ATTGAGCGCAGACGGGCTCAGCCGGGCGATTGGCTGGTGGTCACAGGGCCCCACGGCGACGCGCGGGCCGGCCTGGAGCT GCTGCTCCATCCCGAACAGGGATCCTCAGCCACGGCAGCACAGCGGCAGCAGTTGATCAGAGCCCACCAATACCCGCGCC CGCGCTTGGATGTTCTGTCCCTTTTGGAAGCGCTCCCCGGTCCTCTGCGCCTGGCCGGCATGGACACCAGCGATGGCTTG GCGGACGCCCTGGTGCAGGTGTGCCAGAGCAGTGGGGTAGCGGCGCGGATCGCGGCGGAGCGGATCCCGATTTCGGTGGC TTTGCGCCAGGCGTTCCCGGCCCAAGCTTTGGAGTGGGCGCTTTATGGGGGCGAAGACTTTGAGCTGCTTCTCAGTGCCG AGGTGTCGGTGGCCAAGCATCTGTTGGAAAAGTTGCCAGGAGCCGCCTGGATTGGGGAAGTAACCGGCTGGGATCCGCAG GGGACGGTGCGGTTGCAGGACGGGCAAATCCTCAGCCGCCAGCAGGCCTTCCAGCACTTTTGA
Upstream 100 bases:
>100_bases AATCTTTGGACGAGTAGGGGCTTGGGCTTGACCGGCGCCAACTGCCCCTAACATTTTGCAACCATAGGTTTTTGGCTGCG TGCATCCGCCAGGGGCTCCT
Downstream 100 bases:
>100_bases GCCTGTCTGAAAAACTCACTGGCCACCTAGGCCGCTCAAAACTGCCCAAAGTTGAAAACCAAGCTACTCGAGTCGGAAAG GAAACCGGAACTGGGATTGG
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MFSDLPDFFPQPKSSSSPTPISAIGEAGLLQIVQRYCPAQVVGDDGAVLPAPEGQLVVSTDVLVEGVHFSDVTTPAHAVG WRAVAANLSDLAAMGSRPRALVVGLGLPGSTPVAWVEELYEGMRACCARWGAELVGGDLCRSPQRFVAITALGSVQPGRA IERRRAQPGDWLVVTGPHGDARAGLELLLHPEQGSSATAAQRQQLIRAHQYPRPRLDVLSLLEALPGPLRLAGMDTSDGL ADALVQVCQSSGVAARIAAERIPISVALRQAFPAQALEWALYGGEDFELLLSAEVSVAKHLLEKLPGAAWIGEVTGWDPQ GTVRLQDGQILSRQQAFQHF
Sequences:
>Translated_340_residues MFSDLPDFFPQPKSSSSPTPISAIGEAGLLQIVQRYCPAQVVGDDGAVLPAPEGQLVVSTDVLVEGVHFSDVTTPAHAVG WRAVAANLSDLAAMGSRPRALVVGLGLPGSTPVAWVEELYEGMRACCARWGAELVGGDLCRSPQRFVAITALGSVQPGRA IERRRAQPGDWLVVTGPHGDARAGLELLLHPEQGSSATAAQRQQLIRAHQYPRPRLDVLSLLEALPGPLRLAGMDTSDGL ADALVQVCQSSGVAARIAAERIPISVALRQAFPAQALEWALYGGEDFELLLSAEVSVAKHLLEKLPGAAWIGEVTGWDPQ GTVRLQDGQILSRQQAFQHF >Mature_340_residues MFSDLPDFFPQPKSSSSPTPISAIGEAGLLQIVQRYCPAQVVGDDGAVLPAPEGQLVVSTDVLVEGVHFSDVTTPAHAVG WRAVAANLSDLAAMGSRPRALVVGLGLPGSTPVAWVEELYEGMRACCARWGAELVGGDLCRSPQRFVAITALGSVQPGRA IERRRAQPGDWLVVTGPHGDARAGLELLLHPEQGSSATAAQRQQLIRAHQYPRPRLDVLSLLEALPGPLRLAGMDTSDGL ADALVQVCQSSGVAARIAAERIPISVALRQAFPAQALEWALYGGEDFELLLSAEVSVAKHLLEKLPGAAWIGEVTGWDPQ GTVRLQDGQILSRQQAFQHF
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=307, Percent_Identity=37.1335504885993, Blast_Score=150, Evalue=8e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 36101; Mature: 36101
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSDLPDFFPQPKSSSSPTPISAIGEAGLLQIVQRYCPAQVVGDDGAVLPAPEGQLVVST CCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCEEECCCCCEEECCCCCEEEEH DVLVEGVHFSDVTTPAHAVGWRAVAANLSDLAAMGSRPRALVVGLGLPGSTPVAWVEELY HHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH EGMRACCARWGAELVGGDLCRSPQRFVAITALGSVQPGRAIERRRAQPGDWLVVTGPHGD HHHHHHHHHHCHHHHCCHHHCCCCCEEEEEEECCCCCCHHHHHHCCCCCCEEEEECCCCC ARAGLELLLHPEQGSSATAAQRQQLIRAHQYPRPRLDVLSLLEALPGPLRLAGMDTSDGL CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCH ADALVQVCQSSGVAARIAAERIPISVALRQAFPAQALEWALYGGEDFELLLSAEVSVAKH HHHHHHHHHCCCCEEEHHHHHCCHHHHHHHHCCHHHHHEEEECCCCEEEEEEHHHHHHHH LLEKLPGAAWIGEVTGWDPQGTVRLQDGQILSRQQAFQHF HHHHCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHCC >Mature Secondary Structure MFSDLPDFFPQPKSSSSPTPISAIGEAGLLQIVQRYCPAQVVGDDGAVLPAPEGQLVVST CCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCEEECCCCCEEECCCCCEEEEH DVLVEGVHFSDVTTPAHAVGWRAVAANLSDLAAMGSRPRALVVGLGLPGSTPVAWVEELY HHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH EGMRACCARWGAELVGGDLCRSPQRFVAITALGSVQPGRAIERRRAQPGDWLVVTGPHGD HHHHHHHHHHCHHHHCCHHHCCCCCEEEEEEECCCCCCHHHHHHCCCCCCEEEEECCCCC ARAGLELLLHPEQGSSATAAQRQQLIRAHQYPRPRLDVLSLLEALPGPLRLAGMDTSDGL CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCH ADALVQVCQSSGVAARIAAERIPISVALRQAFPAQALEWALYGGEDFELLLSAEVSVAKH HHHHHHHHHCCCCEEEHHHHHCCHHHHHHHHCCHHHHHEEEECCCCEEEEEEHHHHHHHH LLEKLPGAAWIGEVTGWDPQGTVRLQDGQILSRQQAFQHF HHHHCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA