Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606455

Identifier: 86606455

GI number: 86606455

Start: 1803822

End: 1804709

Strand: Reverse

Name: 86606455

Synonym: CYA_1802

Alternate gene names: NA

Gene position: 1804709-1803822 (Counterclockwise)

Preceding gene: 86606460

Following gene: 86606452

Centisome position: 61.54

GC content: 60.81

Gene sequence:

>888_bases
ATGTCTGCCGTCCGGTTTCAGCCGTTGCGGGTGGCCTTCACCTGTGCGGATCCCAGCCAAGCGCAAATGCCTGTTGCCGA
GTTGCTGGCGGCTCTGCCGGCCTCGCCGCTTCTAGCCTACACCGACCCAGAAGCAGCGGACTTGCGGGTAGAGATGCTGC
CAGATGCCATCTACCACTTCTACCGACGGGAGGAAGAGGTGGCGCTGGCAGCCTTTCGGATCCCGGTAAAAAAGCCACAG
GCTCTGCCCCGCAAGCTGGTGCGGCTGCTGGAACATGTGGCCGCCTTCGACAACCTCCTCAACCTGCAACCTGCCAGCGA
TGCTCTGAGCAGTGTTCTGGAAGTAGAGTTTCTGCAACTGGAAACGCCGGCCAGTGGCTCTAGCCCTGCTGAAGTTAGCC
CTTTGCCGCGGGATCCCCAAGGCCAGGTGCAAATTCAAGCAGGCCGCAACCTCGCCATCGCCCTGCGCAACAGGGCCCTT
ACGCCGGTGCACGTCTATGTAACAGTCTTTGACGAACGGCAGTGCAGCGTCGGTTTAGTCTATCCCTACCAGCCGGACTC
TCCTGCCCGCCTGCGCCCCAGCGAAAGCGTATTAGTTGGCTCTGGCCCTCGCTATCTGCTCCAGATGCAACTGCCCGAAG
ACACAGAAACGGCGGTGGATCGCTTCAAAATCTGGGTCACCAGTACCGGCATGCAGCCGGGCATTATGGCAATGCCCCCT
CTAGGACAAAGGCTGGAGCCCCCCTCTGACGATCCCTATGGCTCCGGATCCCGTCTGGATAGAGAAGTCAGGCTGGCCAT
TCTGGGCAAGGCGGGCAGCACGCCCATGCCAGCTTTTGCCGAGGATCCCTGGTGGTGTATGGAGCAGGCTGTCAAGGTGG
TAGCTTAG

Upstream 100 bases:

>100_bases
ATGCGTTGCCATGCTTTGCCGTTACAGCACAGGGCAAAGCTGGAGCTGGGTCTGCGGATCCGGTAGATCTGGATCACGAG
ATTTTTTCTGAGGATCGCCC

Downstream 100 bases:

>100_bases
ACTGGGCCTACCTCCTCACAATTCTGTACAGCAGAGACTCAACCTCCTCGACACTAATAGCTGAAAGATTATAGGAGGAG
TAGATCCTACTTCTCGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSAVRFQPLRVAFTCADPSQAQMPVAELLAALPASPLLAYTDPEAADLRVEMLPDAIYHFYRREEEVALAAFRIPVKKPQ
ALPRKLVRLLEHVAAFDNLLNLQPASDALSSVLEVEFLQLETPASGSSPAEVSPLPRDPQGQVQIQAGRNLAIALRNRAL
TPVHVYVTVFDERQCSVGLVYPYQPDSPARLRPSESVLVGSGPRYLLQMQLPEDTETAVDRFKIWVTSTGMQPGIMAMPP
LGQRLEPPSDDPYGSGSRLDREVRLAILGKAGSTPMPAFAEDPWWCMEQAVKVVA

Sequences:

>Translated_295_residues
MSAVRFQPLRVAFTCADPSQAQMPVAELLAALPASPLLAYTDPEAADLRVEMLPDAIYHFYRREEEVALAAFRIPVKKPQ
ALPRKLVRLLEHVAAFDNLLNLQPASDALSSVLEVEFLQLETPASGSSPAEVSPLPRDPQGQVQIQAGRNLAIALRNRAL
TPVHVYVTVFDERQCSVGLVYPYQPDSPARLRPSESVLVGSGPRYLLQMQLPEDTETAVDRFKIWVTSTGMQPGIMAMPP
LGQRLEPPSDDPYGSGSRLDREVRLAILGKAGSTPMPAFAEDPWWCMEQAVKVVA
>Mature_294_residues
SAVRFQPLRVAFTCADPSQAQMPVAELLAALPASPLLAYTDPEAADLRVEMLPDAIYHFYRREEEVALAAFRIPVKKPQA
LPRKLVRLLEHVAAFDNLLNLQPASDALSSVLEVEFLQLETPASGSSPAEVSPLPRDPQGQVQIQAGRNLAIALRNRALT
PVHVYVTVFDERQCSVGLVYPYQPDSPARLRPSESVLVGSGPRYLLQMQLPEDTETAVDRFKIWVTSTGMQPGIMAMPPL
GQRLEPPSDDPYGSGSRLDREVRLAILGKAGSTPMPAFAEDPWWCMEQAVKVVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32392; Mature: 32260

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVRFQPLRVAFTCADPSQAQMPVAELLAALPASPLLAYTDPEAADLRVEMLPDAIYHF
CCCCEECCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCHHCEEEEHHHHHHHHH
YRREEEVALAAFRIPVKKPQALPRKLVRLLEHVAAFDNLLNLQPASDALSSVLEVEFLQL
HHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEE
ETPASGSSPAEVSPLPRDPQGQVQIQAGRNLAIALRNRALTPVHVYVTVFDERQCSVGLV
ECCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEE
YPYQPDSPARLRPSESVLVGSGPRYLLQMQLPEDTETAVDRFKIWVTSTGMQPGIMAMPP
ECCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCHHHHHHEEEEEEEECCCCCCEEECCC
LGQRLEPPSDDPYGSGSRLDREVRLAILGKAGSTPMPAFAEDPWWCMEQAVKVVA
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SAVRFQPLRVAFTCADPSQAQMPVAELLAALPASPLLAYTDPEAADLRVEMLPDAIYHF
CCCEECCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCHHCEEEEHHHHHHHHH
YRREEEVALAAFRIPVKKPQALPRKLVRLLEHVAAFDNLLNLQPASDALSSVLEVEFLQL
HHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEE
ETPASGSSPAEVSPLPRDPQGQVQIQAGRNLAIALRNRALTPVHVYVTVFDERQCSVGLV
ECCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEE
YPYQPDSPARLRPSESVLVGSGPRYLLQMQLPEDTETAVDRFKIWVTSTGMQPGIMAMPP
ECCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCHHHHHHEEEEEEEECCCCCCEEECCC
LGQRLEPPSDDPYGSGSRLDREVRLAILGKAGSTPMPAFAEDPWWCMEQAVKVVA
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA