| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606413
Identifier: 86606413
GI number: 86606413
Start: 1764600
End: 1764986
Strand: Reverse
Name: 86606413
Synonym: CYA_1759
Alternate gene names: NA
Gene position: 1764986-1764600 (Counterclockwise)
Preceding gene: 86606415
Following gene: 86606411
Centisome position: 60.18
GC content: 58.14
Gene sequence:
>387_bases GTGGCTTCAAGCAGAAAAGAGCCTGAAAATGGGATCCAACCCTTCCATCTTGCAAAACTTCGTCACACTGAGGAAGCGGG GGTCACGCCTACCGAAGGCCAAGGAAGCTCGATGCTTGAGCCCATCTTGATCGGGTTGAGTGCTGTGCTCTGGGGCCTCC TCTGGGGCTACGCCACGCTGCTGGTCCTGCTGGTGAACTTCAAAGAACAGGGATCCGTTTACGCCTACCCCATGCAGGCC GTGCTGGATCGCTTTGTGGAATCGCTGGGGCTGGGCTGGCTTAAGGATCTACATGCCATGCAACTGCAGCCGCTGCGCCG GATTAGCTACGCCCTCTTTGCCGCCGTTACCCTGGGCGTCGTCTTGATGCTCTGGGTCTTGGGGTAA
Upstream 100 bases:
>100_bases CATAGGGACTCGTCCAGAAGAGGTGGGGCAGGTAACCCTAGTCTGCCATCTTTTGCGTTGGACAACCCTCCTTCCCCTGT CCTAAAAAGCAGGCCTGGAT
Downstream 100 bases:
>100_bases GAGGCCTCCTCAACAATCCTGGGTCTGCCCCCGAGGGAGATGGAAAATAGACTGCAGCTTTTTCAGGCAAGCCTGGATCT GGGCCATCTCTTCTGGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MASSRKEPENGIQPFHLAKLRHTEEAGVTPTEGQGSSMLEPILIGLSAVLWGLLWGYATLLVLLVNFKEQGSVYAYPMQA VLDRFVESLGLGWLKDLHAMQLQPLRRISYALFAAVTLGVVLMLWVLG
Sequences:
>Translated_128_residues MASSRKEPENGIQPFHLAKLRHTEEAGVTPTEGQGSSMLEPILIGLSAVLWGLLWGYATLLVLLVNFKEQGSVYAYPMQA VLDRFVESLGLGWLKDLHAMQLQPLRRISYALFAAVTLGVVLMLWVLG >Mature_127_residues ASSRKEPENGIQPFHLAKLRHTEEAGVTPTEGQGSSMLEPILIGLSAVLWGLLWGYATLLVLLVNFKEQGSVYAYPMQAV LDRFVESLGLGWLKDLHAMQLQPLRRISYALFAAVTLGVVLMLWVLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14136; Mature: 14005
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSRKEPENGIQPFHLAKLRHTEEAGVTPTEGQGSSMLEPILIGLSAVLWGLLWGYATL CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVLLVNFKEQGSVYAYPMQAVLDRFVESLGLGWLKDLHAMQLQPLRRISYALFAAVTLGV HHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLMLWVLG HHHHHHHC >Mature Secondary Structure ASSRKEPENGIQPFHLAKLRHTEEAGVTPTEGQGSSMLEPILIGLSAVLWGLLWGYATL CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVLLVNFKEQGSVYAYPMQAVLDRFVESLGLGWLKDLHAMQLQPLRRISYALFAAVTLGV HHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLMLWVLG HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA