| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606411
Identifier: 86606411
GI number: 86606411
Start: 1762156
End: 1762494
Strand: Reverse
Name: 86606411
Synonym: CYA_1756
Alternate gene names: NA
Gene position: 1762494-1762156 (Counterclockwise)
Preceding gene: 86606413
Following gene: 86606410
Centisome position: 60.1
GC content: 56.64
Gene sequence:
>339_bases ATGGCACACGCTGCAATTATCCTTACGATCCTGCTGGGCTTTTGGGGAGTGGTGGTCAAGCGCAATCTGATCATGAAAAT CTTGGCCATGGATGTGATGAGCACCGGGGTCATCGCCTTTTTTGTCATTTGGGCCGCCCGCACCGGCGTGTTCACTCCCA TCTACAAGCCCTGGCGCCAGGTGGACTATGCCGACCCGGTTCCGCAAGGAATCATCCTCACGGCCATCGTCATCGGCCTG TCGGTACAAGCCCTGATGTTGGTGGGGGTGATGAAGCTGTCCCGCGATCATCCCACCTTGGAAGTGGAGAGTATTGAGCA GGCGGTAGCTGATGACTGA
Upstream 100 bases:
>100_bases CCCCCGTATACGGGGGGGATATAGGGGGGTACGGAGCAGGGCTCCTGCGGCTTCTAGCTGAATGGAAAATCACCATCGAG GCTCAAACGGCAAGGTACCC
Downstream 100 bases:
>100_bases GCTGACGACCGAACTGACGTTGGTCTGGGTGGCACTGCCCTTTTGGCTGGCCTTTGCCACCTACTTGCTGCCGGCTTTGA CCCGTCCCAGCCTGGTCATC
Product: monovalent cation/H+ antiporter subunit C
Products: NA
Alternate protein names: NADH-Ubiquinone Oxidoreductase Chain 4L; NADH-Ubiquinone Oxidoreductase Chain 4l
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAHAAIILTILLGFWGVVVKRNLIMKILAMDVMSTGVIAFFVIWAARTGVFTPIYKPWRQVDYADPVPQGIILTAIVIGL SVQALMLVGVMKLSRDHPTLEVESIEQAVADD
Sequences:
>Translated_112_residues MAHAAIILTILLGFWGVVVKRNLIMKILAMDVMSTGVIAFFVIWAARTGVFTPIYKPWRQVDYADPVPQGIILTAIVIGL SVQALMLVGVMKLSRDHPTLEVESIEQAVADD >Mature_111_residues AHAAIILTILLGFWGVVVKRNLIMKILAMDVMSTGVIAFFVIWAARTGVFTPIYKPWRQVDYADPVPQGIILTAIVIGLS VQALMLVGVMKLSRDHPTLEVESIEQAVADD
Specific function: Unknown
COG id: COG1006
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhC subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12291; Mature: 12160
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHAAIILTILLGFWGVVVKRNLIMKILAMDVMSTGVIAFFVIWAARTGVFTPIYKPWRQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VDYADPVPQGIILTAIVIGLSVQALMLVGVMKLSRDHPTLEVESIEQAVADD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure AHAAIILTILLGFWGVVVKRNLIMKILAMDVMSTGVIAFFVIWAARTGVFTPIYKPWRQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VDYADPVPQGIILTAIVIGLSVQALMLVGVMKLSRDHPTLEVESIEQAVADD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA