Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606406

Identifier: 86606406

GI number: 86606406

Start: 1759213

End: 1759734

Strand: Reverse

Name: 86606406

Synonym: CYA_1751

Alternate gene names: NA

Gene position: 1759734-1759213 (Counterclockwise)

Preceding gene: 86606407

Following gene: 86606405

Centisome position: 60.0

GC content: 59.2

Gene sequence:

>522_bases
ATGGAAGAGACTTTGTTGCTGGTGATCGCCCTGCTGTTGCCCTTGACGGCTGCCTTGGTGGTGACCCAGACCAATCCCTA
TCATGCCTTGGTGATGCGCGGCATTCTGGGATCCATCGCTGCTCTGATCTATGCCTTGTTTGGGGCGGCGGATGTGGCGC
TTACTGAGGCGCTGGTGGGCACCATGCTGTCCATTACGCTCTATGCCATCGCGGTGCGTTCCTCGTTGAGTATGCGCTTG
GGCGTTCTCGAAGACAGTCCTCTGTTGGCGGCCAGGACCTCAGCAGCACAGCAGTTGTTACAGCAGATGCGCCAAGGGCT
ACAGCAGTACCACATGCGTCTGGAGTTGGCCGTCTATGGAAGTGCAGAGGCGTTGTTGGCTGCCCTTCACAGCCGGGAGG
TGCACACCATTGCCCTTGAGCCCGATGAGGAGGTGGCAGAGTATCGCTTGGTAACGCGCGTGCCCCGCCTGCAGGCCATC
TTGACGCAACAAGCCCTGCTTTCTGAGGTCCTCCTGCCATGA

Upstream 100 bases:

>100_bases
TCTGCTGGTGTTGGCCCTGATTTCCTTGGCCATTTGGAACACCATCTTGGGCTATGTGCTGGCCTTTTGCTCGCAGCGCA
AGTCCCTATAGGAGGACAGG

Downstream 100 bases:

>100_bases
GGTGGTTGTACGGGGTGGCGGCGCTGCTGGCAGCCTTGCAGCTCATGGTTGCCGACGCGGGAGCTGTTTCTCCTGCCTTT
GAGCCTGTGGCGGTTCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MEETLLLVIALLLPLTAALVVTQTNPYHALVMRGILGSIAALIYALFGAADVALTEALVGTMLSITLYAIAVRSSLSMRL
GVLEDSPLLAARTSAAQQLLQQMRQGLQQYHMRLELAVYGSAEALLAALHSREVHTIALEPDEEVAEYRLVTRVPRLQAI
LTQQALLSEVLLP

Sequences:

>Translated_173_residues
MEETLLLVIALLLPLTAALVVTQTNPYHALVMRGILGSIAALIYALFGAADVALTEALVGTMLSITLYAIAVRSSLSMRL
GVLEDSPLLAARTSAAQQLLQQMRQGLQQYHMRLELAVYGSAEALLAALHSREVHTIALEPDEEVAEYRLVTRVPRLQAI
LTQQALLSEVLLP
>Mature_173_residues
MEETLLLVIALLLPLTAALVVTQTNPYHALVMRGILGSIAALIYALFGAADVALTEALVGTMLSITLYAIAVRSSLSMRL
GVLEDSPLLAARTSAAQQLLQQMRQGLQQYHMRLELAVYGSAEALLAALHSREVHTIALEPDEEVAEYRLVTRVPRLQAI
LTQQALLSEVLLP

Specific function: Unknown

COG id: COG1563

COG function: function code P; Predicted subunit of the Multisubunit Na+/H+ antiporter

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18753; Mature: 18753

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEETLLLVIALLLPLTAALVVTQTNPYHALVMRGILGSIAALIYALFGAADVALTEALVG
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMLSITLYAIAVRSSLSMRLGVLEDSPLLAARTSAAQQLLQQMRQGLQQYHMRLELAVYG
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
SAEALLAALHSREVHTIALEPDEEVAEYRLVTRVPRLQAILTQQALLSEVLLP
CHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEETLLLVIALLLPLTAALVVTQTNPYHALVMRGILGSIAALIYALFGAADVALTEALVG
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMLSITLYAIAVRSSLSMRLGVLEDSPLLAARTSAAQQLLQQMRQGLQQYHMRLELAVYG
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
SAEALLAALHSREVHTIALEPDEEVAEYRLVTRVPRLQAILTQQALLSEVLLP
CHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA