| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606405
Identifier: 86606405
GI number: 86606405
Start: 1758557
End: 1759216
Strand: Reverse
Name: 86606405
Synonym: CYA_1750
Alternate gene names: NA
Gene position: 1759216-1758557 (Counterclockwise)
Preceding gene: 86606406
Following gene: 86606404
Centisome position: 59.98
GC content: 61.21
Gene sequence:
>660_bases ATGAGGTGGTTGTACGGGGTGGCGGCGCTGCTGGCAGCCTTGCAGCTCATGGTTGCCGACGCGGGAGCTGTTTCTCCTGC CTTTGAGCCTGTGGCGGTTCTGGCCGGAGAAAGCGGCGTGCCCAATACGGTGACGGGCTTGATCCTGCGCAACCGCCTTT ACGACACCGTCTTTGAAGTCGTCGTGTTTTCTACGGCCATTCTGGGCGCGCAGTACCTGCTGGCGGATGAGCGACCGACG GCCAATGTAGCTCAGTTTACCGATATTCCCTCAATTGTGTTGGCGCGGGTGGGGGCCACCATCTCCGCTCTGATTGGGGT GGAGCTGGCCATTCGGGGTCACCTGACGCCGGGCGGGGGGTTTGCTGCCGGCGTGGCGGGAGGAACGGCGATTGGCTTGG TGGCGATCACCGCCTCTTCGACCTGGATGGAGGCCATCTACAAGCGGTGGCAAGCCGCGATGTGGGAGAAGCTGTCGGTG GTGACGTTTATCGGGGTGGCTGTAATCGCCCTGGCCGGTTGGGAACTACCCAAGGGCGAGCTGGGGGCACTTTTTAGCGG CGGCTGGATCCCAATCCTCAACATTTTGGTGGCCATCAAGGTGGCGCTGGGATCCTGGGCGGCGATTTTAATTTTTATTC GCTACCGCGGCTTGTTATGA
Upstream 100 bases:
>100_bases AGCCCGATGAGGAGGTGGCAGAGTATCGCTTGGTAACGCGCGTGCCCCGCCTGCAGGCCATCTTGACGCAACAAGCCCTG CTTTCTGAGGTCCTCCTGCC
Downstream 100 bases:
>100_bases AGGCTCGAACGGGTTGATAACGCTCGTGTCAAGCCAATACATCGTGGGCGGTGTTATCTTCTTGCATCCGCTCGAAGTCC GAATCTTCACCAATGTTTGG
Product: monovalent cation/H+ antiporter subunit B
Products: NA
Alternate protein names: Na+/H+ Antiporter MnhB Subunit-Related Protein; Na+/H+ Antiporter Family Domain Protein; Na+ Antiporter MnhB Subunit-Related Protein; Transporter CationProton Antiporter Family
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MRWLYGVAALLAALQLMVADAGAVSPAFEPVAVLAGESGVPNTVTGLILRNRLYDTVFEVVVFSTAILGAQYLLADERPT ANVAQFTDIPSIVLARVGATISALIGVELAIRGHLTPGGGFAAGVAGGTAIGLVAITASSTWMEAIYKRWQAAMWEKLSV VTFIGVAVIALAGWELPKGELGALFSGGWIPILNILVAIKVALGSWAAILIFIRYRGLL
Sequences:
>Translated_219_residues MRWLYGVAALLAALQLMVADAGAVSPAFEPVAVLAGESGVPNTVTGLILRNRLYDTVFEVVVFSTAILGAQYLLADERPT ANVAQFTDIPSIVLARVGATISALIGVELAIRGHLTPGGGFAAGVAGGTAIGLVAITASSTWMEAIYKRWQAAMWEKLSV VTFIGVAVIALAGWELPKGELGALFSGGWIPILNILVAIKVALGSWAAILIFIRYRGLL >Mature_219_residues MRWLYGVAALLAALQLMVADAGAVSPAFEPVAVLAGESGVPNTVTGLILRNRLYDTVFEVVVFSTAILGAQYLLADERPT ANVAQFTDIPSIVLARVGATISALIGVELAIRGHLTPGGGFAAGVAGGTAIGLVAITASSTWMEAIYKRWQAAMWEKLSV VTFIGVAVIALAGWELPKGELGALFSGGWIPILNILVAIKVALGSWAAILIFIRYRGLL
Specific function: Unknown
COG id: COG2111
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhB subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22874; Mature: 22874
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLYGVAALLAALQLMVADAGAVSPAFEPVAVLAGESGVPNTVTGLILRNRLYDTVFEV CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHH VVFSTAILGAQYLLADERPTANVAQFTDIPSIVLARVGATISALIGVELAIRGHLTPGGG HHHHHHHHHHHHHEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC FAAGVAGGTAIGLVAITASSTWMEAIYKRWQAAMWEKLSVVTFIGVAVIALAGWELPKGE CCHHCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LGALFSGGWIPILNILVAIKVALGSWAAILIFIRYRGLL CCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRWLYGVAALLAALQLMVADAGAVSPAFEPVAVLAGESGVPNTVTGLILRNRLYDTVFEV CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHH VVFSTAILGAQYLLADERPTANVAQFTDIPSIVLARVGATISALIGVELAIRGHLTPGGG HHHHHHHHHHHHHEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC FAAGVAGGTAIGLVAITASSTWMEAIYKRWQAAMWEKLSVVTFIGVAVIALAGWELPKGE CCHHCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LGALFSGGWIPILNILVAIKVALGSWAAILIFIRYRGLL CCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA