Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606366

Identifier: 86606366

GI number: 86606366

Start: 1720146

End: 1720778

Strand: Reverse

Name: 86606366

Synonym: CYA_1711

Alternate gene names: NA

Gene position: 1720778-1720146 (Counterclockwise)

Preceding gene: 86606367

Following gene: 86606365

Centisome position: 58.67

GC content: 63.03

Gene sequence:

>633_bases
ATGCCGTTCCTAGGCTGGTGTAGCCGGCGAAGAAGACAAGCGGGCGGGTATCTTTTCCCCCACCCCGCCCGAGGGGGGTG
GCGGATAGGTTTGTCGGCGGCTTTGGGGTTGTGCTGCCTTACTGCCACAGCAGCCAGAGGAGAAGTTTGTGCTGCCGATC
CGCAAACCTGGGCTGAAGCCCTGACAGAGCAGTTGCCCTTGTTTCTCAATTTGGCCTTGAGCCGCGCCCGCTCAGACTTT
CAGGTGGTGTTGGTGGGCCGGCCAGAGGCCGAACTCCTCTCTGCCGAGGAGCTGGCCCAGCTTCTGCCGGATAGCCCAGC
CGCCTCGGCTTCCCAAGGCTTTCGCTTGTATTTCACCACGCTGGAGCGCCGCTTGGTTCTGCCCCAGCAGCCCGAGCGGG
AGGATAACCCCCTAGCCGGTCGGCGCAGCGAAACCCTGCAACTGGCTTATGAAGCTTATGTGCTGCGGGCTACACCTGGG
GATCCCTGGCAACTGGTGCGCCTGCAGGTTACCGGCGCCGGTGTTCCTGTCCGCGACGTCACCGAAGGACTGACCGCCCA
AGCCATTCGTCGCTGGCAGGAGGCTGGGTGTCCCTTGACGGGCGATCTAGAGTTGACTAGGCCTACCCTATGA

Upstream 100 bases:

>100_bases
ATTTGGTGGTGGGCCGCCCCATCACGGCGGCTGCGGATCCCGTTTCGGCCTGGCAACGCTTTCAAGCTGTAGAGGAAGCG
ATCGGCTGAGGATTGGGGCA

Downstream 100 bases:

>100_bases
AGTTTCCCCCCGCCATGCCTCCTCAGGGCAAACGGCTGTCTCGTCCCTCTTTTCCTCAACTGAGCCTGTCCAGGGCGGAC
AAACGTCGGCACCACCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MPFLGWCSRRRRQAGGYLFPHPARGGWRIGLSAALGLCCLTATAARGEVCAADPQTWAEALTEQLPLFLNLALSRARSDF
QVVLVGRPEAELLSAEELAQLLPDSPAASASQGFRLYFTTLERRLVLPQQPEREDNPLAGRRSETLQLAYEAYVLRATPG
DPWQLVRLQVTGAGVPVRDVTEGLTAQAIRRWQEAGCPLTGDLELTRPTL

Sequences:

>Translated_210_residues
MPFLGWCSRRRRQAGGYLFPHPARGGWRIGLSAALGLCCLTATAARGEVCAADPQTWAEALTEQLPLFLNLALSRARSDF
QVVLVGRPEAELLSAEELAQLLPDSPAASASQGFRLYFTTLERRLVLPQQPEREDNPLAGRRSETLQLAYEAYVLRATPG
DPWQLVRLQVTGAGVPVRDVTEGLTAQAIRRWQEAGCPLTGDLELTRPTL
>Mature_209_residues
PFLGWCSRRRRQAGGYLFPHPARGGWRIGLSAALGLCCLTATAARGEVCAADPQTWAEALTEQLPLFLNLALSRARSDFQ
VVLVGRPEAELLSAEELAQLLPDSPAASASQGFRLYFTTLERRLVLPQQPEREDNPLAGRRSETLQLAYEAYVLRATPGD
PWQLVRLQVTGAGVPVRDVTEGLTAQAIRRWQEAGCPLTGDLELTRPTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23035; Mature: 22903

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLGWCSRRRRQAGGYLFPHPARGGWRIGLSAALGLCCLTATAARGEVCAADPQTWAEA
CCCHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEECCCHHHHHHH
LTEQLPLFLNLALSRARSDFQVVLVGRPEAELLSAEELAQLLPDSPAASASQGFRLYFTT
HHHHCHHHHHHHHHHCCCCEEEEEEECCCHHHHCHHHHHHHCCCCCCCCCCCCCEEEEEE
LERRLVLPQQPEREDNPLAGRRSETLQLAYEAYVLRATPGDPWQLVRLQVTGAGVPVRDV
HHHHCCCCCCCCCCCCCCCCCCHHHHEEEEEEEEEECCCCCCEEEEEEEEECCCCCHHHH
TEGLTAQAIRRWQEAGCPLTGDLELTRPTL
HHHHHHHHHHHHHHCCCCCCCCCEECCCCC
>Mature Secondary Structure 
PFLGWCSRRRRQAGGYLFPHPARGGWRIGLSAALGLCCLTATAARGEVCAADPQTWAEA
CCHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEECCCHHHHHHH
LTEQLPLFLNLALSRARSDFQVVLVGRPEAELLSAEELAQLLPDSPAASASQGFRLYFTT
HHHHCHHHHHHHHHHCCCCEEEEEEECCCHHHHCHHHHHHHCCCCCCCCCCCCCEEEEEE
LERRLVLPQQPEREDNPLAGRRSETLQLAYEAYVLRATPGDPWQLVRLQVTGAGVPVRDV
HHHHCCCCCCCCCCCCCCCCCCHHHHEEEEEEEEEECCCCCCEEEEEEEEECCCCCHHHH
TEGLTAQAIRRWQEAGCPLTGDLELTRPTL
HHHHHHHHHHHHHHCCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA