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The map label for this gene is ndhE

Identifier: 86606290

GI number: 86606290

Start: 1632594

End: 1632902

Strand: Reverse

Name: ndhE

Synonym: CYA_1630

Alternate gene names: 86606290

Gene position: 1632902-1632594 (Counterclockwise)

Preceding gene: 86606291

Following gene: 86606288

Centisome position: 55.68

GC content: 54.05

Gene sequence:

>309_bases
ATGTTGCAACTGCAGTTTTTCTTGGTGGTCGCGGCAATTCTTTTCTGCATCGGCATCTACGGCTTGATCGTCAGTCGCAA
CGCCATTCGGGTGTTGATGTCGATTGAGCTGATGCTCAACGCCGTCAACCTGAACTTTATGGCTTTCTCCAACTTTGTCG
ACTCGGGCTTGATTCGCGGCCAAGTGTTTTCGGTATTTGTCATCACCGTGGCGGCTGCCGAGGCGGCAGTGGGCTTGGCC
ATTGTGTTGGGGATCTACCGCAACCGCGCCACCATCGACATGGAGAGCTTTAACCTGCTCAGGTGGTAG

Upstream 100 bases:

>100_bases
GCAGAGCTGGTGAGCACGCGTTGAAGCTGCCTGCTCTCGGCCATACAGCCCAGCGTTTTCCTGATGCCCCTCTCATCTGT
ATCCAGTGGAGCCTCTTGTG

Downstream 100 bases:

>100_bases
TTGTTTTCTTGATCGATGACTTTCAGGTGCGGCTGGGCAGCGGCGGGCATTGGATCCCAGGGATCAGGGATTCCAGCAGG
CCGCTGCAGGCGTCCCAGAG

Product: NADH dehydrogenase subunit K

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase subunit 4L; NADH-plastoquinone oxidoreductase subunit 4L; NDH-1, subunit 4L; NDH-E

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MLQLQFFLVVAAILFCIGIYGLIVSRNAIRVLMSIELMLNAVNLNFMAFSNFVDSGLIRGQVFSVFVITVAAAEAAVGLA
IVLGIYRNRATIDMESFNLLRW

Sequences:

>Translated_102_residues
MLQLQFFLVVAAILFCIGIYGLIVSRNAIRVLMSIELMLNAVNLNFMAFSNFVDSGLIRGQVFSVFVITVAAAEAAVGLA
IVLGIYRNRATIDMESFNLLRW
>Mature_102_residues
MLQLQFFLVVAAILFCIGIYGLIVSRNAIRVLMSIELMLNAVNLNFMAFSNFVDSGLIRGQVFSVFVITVAAAEAAVGLA
IVLGIYRNRATIDMESFNLLRW

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: COG0713

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 4L family

Homologues:

Organism=Escherichia coli, GI1788615, Length=101, Percent_Identity=38.6138613861386, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NU4LC_SYNJA (Q2JU34)

Other databases:

- EMBL:   CP000239
- RefSeq:   YP_475053.1
- STRING:   Q2JU34
- GeneID:   3897589
- GenomeReviews:   CP000239_GR
- KEGG:   cya:CYA_1630
- TIGR:   CYA_1630
- eggNOG:   COG0713
- HOGENOM:   HBG673066
- OMA:   VLMSIEL
- ProtClustDB:   PRK05715
- BioCyc:   SSP321327:CYA_1630-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01456
- InterPro:   IPR001133

Pfam domain/function: PF00420 Oxidored_q2

EC number: 1.6.5.3

Molecular weight: Translated: 11291; Mature: 11291

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x14500334)-; HASH(0x148835e4)-; HASH(0x153c30a0)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQLQFFLVVAAILFCIGIYGLIVSRNAIRVLMSIELMLNAVNLNFMAFSNFVDSGLIRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHH
QVFSVFVITVAAAEAAVGLAIVLGIYRNRATIDMESFNLLRW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCH
>Mature Secondary Structure
MLQLQFFLVVAAILFCIGIYGLIVSRNAIRVLMSIELMLNAVNLNFMAFSNFVDSGLIRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHH
QVFSVFVITVAAAEAAVGLAIVLGIYRNRATIDMESFNLLRW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA