Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606288

Identifier: 86606288

GI number: 86606288

Start: 1631671

End: 1631919

Strand: Reverse

Name: 86606288

Synonym: CYA_1628

Alternate gene names: NA

Gene position: 1631919-1631671 (Counterclockwise)

Preceding gene: 86606290

Following gene: 86606287

Centisome position: 55.64

GC content: 59.04

Gene sequence:

>249_bases
ATGCCAGATGCCACCCGCTACCCCCACCCGCAGGATGTGGCCAACCTCATTCTCTACTTGCAAACGGAGCTGGCTCTGTT
TGAACAATGGGCTGCTCAAGAAGGGATCCCGTCTGCGGCTCTGCGCCCCATCGAGCGCTCCCAAGAGGCTTTGCGGCGAG
CTGTAGATCAACTGGAGCTGCGGGAGTGGTACCGCGAACTCACCTATGGCTTTCGGGATCAGTTGGGGCGCCTAGAAGAA
TGGTTGTAG

Upstream 100 bases:

>100_bases
GCCCAGAGTACAGAAGCAGGCGAGAGGGGATAGGGCCCTCAGGCGGCAGCGGGACAGATTCTTGGCCAGAATGGAGCTAG
TTCCCCTGGTGAGATGTCTT

Downstream 100 bases:

>100_bases
CTGTCCGGCAGAGCTTTCCAGTGCCAAAATAACGACAACTTTCCCAGGGGCGCCGCTCATGTTGCAGGTTCAGGATCTCT
GCTACCACCCGGCAACCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MPDATRYPHPQDVANLILYLQTELALFEQWAAQEGIPSAALRPIERSQEALRRAVDQLELREWYRELTYGFRDQLGRLEE
WL

Sequences:

>Translated_82_residues
MPDATRYPHPQDVANLILYLQTELALFEQWAAQEGIPSAALRPIERSQEALRRAVDQLELREWYRELTYGFRDQLGRLEE
WL
>Mature_81_residues
PDATRYPHPQDVANLILYLQTELALFEQWAAQEGIPSAALRPIERSQEALRRAVDQLELREWYRELTYGFRDQLGRLEEW
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9743; Mature: 9612

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDATRYPHPQDVANLILYLQTELALFEQWAAQEGIPSAALRPIERSQEALRRAVDQLEL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
REWYRELTYGFRDQLGRLEEWL
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDATRYPHPQDVANLILYLQTELALFEQWAAQEGIPSAALRPIERSQEALRRAVDQLEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
REWYRELTYGFRDQLGRLEEWL
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA