Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606243

Identifier: 86606243

GI number: 86606243

Start: 1589713

End: 1589835

Strand: Reverse

Name: 86606243

Synonym: CYA_1580

Alternate gene names: NA

Gene position: 1589835-1589713 (Counterclockwise)

Preceding gene: 86606244

Following gene: 90296796

Centisome position: 54.21

GC content: 54.47

Gene sequence:

>123_bases
ATGTCTTACGCCAAGACGATTGTCTGTTTCGCCAACTCCAGAAAAATGGCCGGTCGCTGTATTGCCGGCAAGGAATGGCA
GAACGGAGAGCCGGGGGAATGGATGCGTCTCATGAGGCTCTAG

Upstream 100 bases:

>100_bases
TTTGATCCCCTTTCGCCCTGAAGAACGGATTTGACTACTGGACTTTCAAGAAGCCGAAAATTACTCCCATTGAGCCTTTG
CCCTTGCCCCAGAAGCCTGT

Downstream 100 bases:

>100_bases
AATCTCGTCTTCTTGCCCTTTGCAAACTTCCAGAGGGGGACTTGTTTAGAAGTCGGGAAGAGTTTATAGCCGAAGCCTAT
CTCATTCAAGGCAGGCGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 40; Mature: 39

Protein sequence:

>40_residues
MSYAKTIVCFANSRKMAGRCIAGKEWQNGEPGEWMRLMRL

Sequences:

>Translated_40_residues
MSYAKTIVCFANSRKMAGRCIAGKEWQNGEPGEWMRLMRL
>Mature_39_residues
SYAKTIVCFANSRKMAGRCIAGKEWQNGEPGEWMRLMRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4622; Mature: 4490

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
10.0 %Met     (Translated Protein)
15.0 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
12.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAKTIVCFANSRKMAGRCIAGKEWQNGEPGEWMRLMRL
CCCCCEEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
SYAKTIVCFANSRKMAGRCIAGKEWQNGEPGEWMRLMRL
CCCCEEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA