Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606213

Identifier: 86606213

GI number: 86606213

Start: 1558160

End: 1559056

Strand: Reverse

Name: 86606213

Synonym: CYA_1549

Alternate gene names: NA

Gene position: 1559056-1558160 (Counterclockwise)

Preceding gene: 86606214

Following gene: 86606212

Centisome position: 53.16

GC content: 60.2

Gene sequence:

>897_bases
ATGTTCAAAAGCCTGTTGATCGCCACCGATTGCCGCGATGGACTGCAGCGTTTTGGCAAATGCCTAGAAGAGCTTTACCT
GAATGGGATTGAGCGCGTTGCCTTTGTGCATAGCGTCGCTCGGCAGGACGACGACATTGGCCTTCCCGAAGACCTCACCC
CCAAAGTGCAGGCGCAACAGGCTCGCTTACACAAGGTGTTGAGCGCCGTTCCTGCAGGGCTGGAAGTCGAAGTCTTGGTG
CAGGCGGGCAAGGCGGTGGATCTGATTTTAAGAGGGATCCAAACCTGCAGCTCCGACTTGCTAATCACAGGCATGGGGAT
CCACGATCTGCTCACCGAAAAACTGTTTGGAAGCACCACCTTGGAGCTGCTGCCGAAGCTGACCATCCCGGTAATGGTGA
TGCGTCCGCAACTCATCGCCGCCTTTACTCTGGAAGAATTGCGCCTGCGCAGCCGCCACCTATTTCGCTCCCTCCTAGTG
CCTTTTGACTTTGAGGAGCCCCGCCGGCAGCTCCTCAGCCGTCTTGGCCAACTGCTGCCAGGAACTTCCCAGTGTCAGGC
CATTACGCTGCTCTATGTGGTGGATCCCAGCGCCCGCCGCAACCAGGGATCGCCGGCAGAAGAGCTCAAGCGCAGGGCCG
AGGCCGACTTGGCCCGGTTAGTCGAACCGCTGGTCGAGCAGGTAAAACCGGTGCAGTTGCGGGCCTTGGTGCGGGTGGGA
TCCCCGCTTCAGGAAATCCTAGCCACCGCCGCCGATGAGGACATGACCGCCATTGCCACCGCCTCGCCGCGGGTGGGCAG
CTTCTGGGAGTGGTCGGTTCGCAGCCTCACTGGCGAGATCCTGCGGCAAAGTTGGCATCCGGTGTTGTTTTTCCCGCGCG
GGTCTTTGGCCCAGTAG

Upstream 100 bases:

>100_bases
GACTCCTTTCAAGGACAGGTCCGGGGTGCGAGGTGTTAGCCTGAGATTGCCCCCCTAGGGCAGGTCGCTGTTGCTGGCTA
CCCCCTCTGCCTAAAGCCAT

Downstream 100 bases:

>100_bases
AGCCGCTCCATCCCCTTGCTATGCCCGACCCAACCCAAACCTTGTGGGAACTGTTCCAAGCGGTGGCCCAAGGGCAGCTC
TCTGCCGAGCAAGCCCTGCA

Product: universal stress protein

Products: NA

Alternate protein names: Universal Stress Protein; Universal Stress Protein Family; UspA Domain-Containing Protein; Universal Stress Protein Family Protein

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MFKSLLIATDCRDGLQRFGKCLEELYLNGIERVAFVHSVARQDDDIGLPEDLTPKVQAQQARLHKVLSAVPAGLEVEVLV
QAGKAVDLILRGIQTCSSDLLITGMGIHDLLTEKLFGSTTLELLPKLTIPVMVMRPQLIAAFTLEELRLRSRHLFRSLLV
PFDFEEPRRQLLSRLGQLLPGTSQCQAITLLYVVDPSARRNQGSPAEELKRRAEADLARLVEPLVEQVKPVQLRALVRVG
SPLQEILATAADEDMTAIATASPRVGSFWEWSVRSLTGEILRQSWHPVLFFPRGSLAQ

Sequences:

>Translated_298_residues
MFKSLLIATDCRDGLQRFGKCLEELYLNGIERVAFVHSVARQDDDIGLPEDLTPKVQAQQARLHKVLSAVPAGLEVEVLV
QAGKAVDLILRGIQTCSSDLLITGMGIHDLLTEKLFGSTTLELLPKLTIPVMVMRPQLIAAFTLEELRLRSRHLFRSLLV
PFDFEEPRRQLLSRLGQLLPGTSQCQAITLLYVVDPSARRNQGSPAEELKRRAEADLARLVEPLVEQVKPVQLRALVRVG
SPLQEILATAADEDMTAIATASPRVGSFWEWSVRSLTGEILRQSWHPVLFFPRGSLAQ
>Mature_298_residues
MFKSLLIATDCRDGLQRFGKCLEELYLNGIERVAFVHSVARQDDDIGLPEDLTPKVQAQQARLHKVLSAVPAGLEVEVLV
QAGKAVDLILRGIQTCSSDLLITGMGIHDLLTEKLFGSTTLELLPKLTIPVMVMRPQLIAAFTLEELRLRSRHLFRSLLV
PFDFEEPRRQLLSRLGQLLPGTSQCQAITLLYVVDPSARRNQGSPAEELKRRAEADLARLVEPLVEQVKPVQLRALVRVG
SPLQEILATAADEDMTAIATASPRVGSFWEWSVRSLTGEILRQSWHPVLFFPRGSLAQ

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33156; Mature: 33156

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKSLLIATDCRDGLQRFGKCLEELYLNGIERVAFVHSVARQDDDIGLPEDLTPKVQAQQ
CCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ARLHKVLSAVPAGLEVEVLVQAGKAVDLILRGIQTCSSDLLITGMGIHDLLTEKLFGSTT
HHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCHH
LELLPKLTIPVMVMRPQLIAAFTLEELRLRSRHLFRSLLVPFDFEEPRRQLLSRLGQLLP
HHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
GTSQCQAITLLYVVDPSARRNQGSPAEELKRRAEADLARLVEPLVEQVKPVQLRALVRVG
CCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
SPLQEILATAADEDMTAIATASPRVGSFWEWSVRSLTGEILRQSWHPVLFFPRGSLAQ
CHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
>Mature Secondary Structure
MFKSLLIATDCRDGLQRFGKCLEELYLNGIERVAFVHSVARQDDDIGLPEDLTPKVQAQQ
CCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ARLHKVLSAVPAGLEVEVLVQAGKAVDLILRGIQTCSSDLLITGMGIHDLLTEKLFGSTT
HHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCHH
LELLPKLTIPVMVMRPQLIAAFTLEELRLRSRHLFRSLLVPFDFEEPRRQLLSRLGQLLP
HHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
GTSQCQAITLLYVVDPSARRNQGSPAEELKRRAEADLARLVEPLVEQVKPVQLRALVRVG
CCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
SPLQEILATAADEDMTAIATASPRVGSFWEWSVRSLTGEILRQSWHPVLFFPRGSLAQ
CHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA