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The map label for this gene is yebA [C]

Identifier: 86606196

GI number: 86606196

Start: 1542429

End: 1543451

Strand: Reverse

Name: yebA [C]

Synonym: CYA_1531

Alternate gene names: 86606196

Gene position: 1543451-1542429 (Counterclockwise)

Preceding gene: 86606198

Following gene: 86606191

Centisome position: 52.63

GC content: 64.03

Gene sequence:

>1023_bases
ATGAGAAGCTCCCGTAGGGTGGTTGATCAGAGCCGCCTCGCTACCCCACCGCTTGAGCAGCGGCTGAGGAGAAAAGCGGA
TGGCCAAAGCAAACTGCCTGGCCTGACCAGGGTAGGCCTGCTGATATTTTTCTGCCTATTGTATCAATTCGTAAACATCC
TGCCTGGTTTTCCGCAGAGCTCCTCTTGGTCAGAGGGATCCCTGAGGGGAGTGTACGCTCAGTTGAGGCGGGCTGTGGAG
CGCCGGGACTGGGCTCAGGCCTTGCGCCTGGTGGATCTTCTGCTGCAGCGGTCCCCAGATCCCGCCCAGCGTCAGGATCT
GGAGCACTATCGGTTGGCGCTGGAGAGCCATCGCTCTTCTAATGGGGATCCGCCGCCGCCCCAGTGGCCGTTTTTGCACA
AGCCCTTTGTCGGGGAATTTCCCGTCACCAACCTCTTCGACCACGACTTGCCCTTGGGGGAGGAGGATGGCAACGGACGG
TTTGTCAGTGGGCAAGGCCAAGTCTGGATCCCTGGCCCGCTGCACCCCTGCGGCAAAAGCGATGGCCATGCCGGCTATGA
CTGGGCCATGCCGGTGGGCACCCCCATCCTGGCCGCCGCCCCAGGACGGGTTACCGTAGCGCGTCCGGAGCCAGCGTTTT
TCTGCCCTGCCTTGGGTCGCCCGGTCAGGGGGTTGCGGGTGCGCATTCTGCACGAGCCAGCTGGCTTGGAAACCCTCTAC
GCCCACCTCAGCCAAATCCAGGTGCAGGAGGGACAGAGGGTAGCCGCCGGGGAGGTGATCGGCCTGTCGGGCGACAGCGG
CTGTGCCAGCGGGCCCCATCTCCATTTCGAGGTGCGCCGTCTCAACCCAACCAACTCCGGCCAACCCGCCCCCGTCGATC
CCTACGGCTGGTTTGGGCCTGGCCTGGATCCCTGGAGCCTGCATCCCCTGGGAGCCGAAAGCCTGTTTCTCTGGCAGGTG
GGCCAAGCGCCCAGCCTAGGCGCCTGCTGGCAGGCTCAACAGCTCTCTGGCCCTCCTCAATAG

Upstream 100 bases:

>100_bases
CCAGATTGACCCAAACCCAAGGAGAACACCTCGCCTATCAGAAAACCGGAAAGGCAGGCTAACAAGGACACCAGAGGATA
ACGAGGAGAACAGCCAACGC

Downstream 100 bases:

>100_bases
ACTAGAGACATTTCCCGCAGCCCCGACCCCTCTCCCAGTGGGAGAGGGGAGTTGCAAGGGACTGCTTTGTGGCAATTTGG
AACGAATCCCAGCGGTCTAT

Product: M23B family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MRSSRRVVDQSRLATPPLEQRLRRKADGQSKLPGLTRVGLLIFFCLLYQFVNILPGFPQSSSWSEGSLRGVYAQLRRAVE
RRDWAQALRLVDLLLQRSPDPAQRQDLEHYRLALESHRSSNGDPPPPQWPFLHKPFVGEFPVTNLFDHDLPLGEEDGNGR
FVSGQGQVWIPGPLHPCGKSDGHAGYDWAMPVGTPILAAAPGRVTVARPEPAFFCPALGRPVRGLRVRILHEPAGLETLY
AHLSQIQVQEGQRVAAGEVIGLSGDSGCASGPHLHFEVRRLNPTNSGQPAPVDPYGWFGPGLDPWSLHPLGAESLFLWQV
GQAPSLGACWQAQQLSGPPQ

Sequences:

>Translated_340_residues
MRSSRRVVDQSRLATPPLEQRLRRKADGQSKLPGLTRVGLLIFFCLLYQFVNILPGFPQSSSWSEGSLRGVYAQLRRAVE
RRDWAQALRLVDLLLQRSPDPAQRQDLEHYRLALESHRSSNGDPPPPQWPFLHKPFVGEFPVTNLFDHDLPLGEEDGNGR
FVSGQGQVWIPGPLHPCGKSDGHAGYDWAMPVGTPILAAAPGRVTVARPEPAFFCPALGRPVRGLRVRILHEPAGLETLY
AHLSQIQVQEGQRVAAGEVIGLSGDSGCASGPHLHFEVRRLNPTNSGQPAPVDPYGWFGPGLDPWSLHPLGAESLFLWQV
GQAPSLGACWQAQQLSGPPQ
>Mature_340_residues
MRSSRRVVDQSRLATPPLEQRLRRKADGQSKLPGLTRVGLLIFFCLLYQFVNILPGFPQSSSWSEGSLRGVYAQLRRAVE
RRDWAQALRLVDLLLQRSPDPAQRQDLEHYRLALESHRSSNGDPPPPQWPFLHKPFVGEFPVTNLFDHDLPLGEEDGNGR
FVSGQGQVWIPGPLHPCGKSDGHAGYDWAMPVGTPILAAAPGRVTVARPEPAFFCPALGRPVRGLRVRILHEPAGLETLY
AHLSQIQVQEGQRVAAGEVIGLSGDSGCASGPHLHFEVRRLNPTNSGQPAPVDPYGWFGPGLDPWSLHPLGAESLFLWQV
GQAPSLGACWQAQQLSGPPQ

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=102, Percent_Identity=41.1764705882353, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 37348; Mature: 37348

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSRRVVDQSRLATPPLEQRLRRKADGQSKLPGLTRVGLLIFFCLLYQFVNILPGFPQS
CCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
SSWSEGSLRGVYAQLRRAVERRDWAQALRLVDLLLQRSPDPAQRQDLEHYRLALESHRSS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
NGDPPPPQWPFLHKPFVGEFPVTNLFDHDLPLGEEDGNGRFVSGQGQVWIPGPLHPCGKS
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCC
DGHAGYDWAMPVGTPILAAAPGRVTVARPEPAFFCPALGRPVRGLRVRILHEPAGLETLY
CCCCCCEECCCCCCCEEEECCCEEEEECCCCCEECCCCCCCCCCEEEEEEECCCCHHHHH
AHLSQIQVQEGQRVAAGEVIGLSGDSGCASGPHLHFEVRRLNPTNSGQPAPVDPYGWFGP
HHHHHHHHHCCCEEECCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
GLDPWSLHPLGAESLFLWQVGQAPSLGACWQAQQLSGPPQ
CCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MRSSRRVVDQSRLATPPLEQRLRRKADGQSKLPGLTRVGLLIFFCLLYQFVNILPGFPQS
CCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
SSWSEGSLRGVYAQLRRAVERRDWAQALRLVDLLLQRSPDPAQRQDLEHYRLALESHRSS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
NGDPPPPQWPFLHKPFVGEFPVTNLFDHDLPLGEEDGNGRFVSGQGQVWIPGPLHPCGKS
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCC
DGHAGYDWAMPVGTPILAAAPGRVTVARPEPAFFCPALGRPVRGLRVRILHEPAGLETLY
CCCCCCEECCCCCCCEEEECCCEEEEECCCCCEECCCCCCCCCCEEEEEEECCCCHHHHH
AHLSQIQVQEGQRVAAGEVIGLSGDSGCASGPHLHFEVRRLNPTNSGQPAPVDPYGWFGP
HHHHHHHHHCCCEEECCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
GLDPWSLHPLGAESLFLWQVGQAPSLGACWQAQQLSGPPQ
CCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]