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The map label for this gene is ybbK [C]

Identifier: 86606191

GI number: 86606191

Start: 1538229

End: 1539197

Strand: Reverse

Name: ybbK [C]

Synonym: CYA_1526

Alternate gene names: 86606191

Gene position: 1539197-1538229 (Counterclockwise)

Preceding gene: 86606196

Following gene: 86606190

Centisome position: 52.48

GC content: 57.89

Gene sequence:

>969_bases
ATGCCAGGCATCTTAGCGGCAATCGCCCTGATCTTCCTCGGTTACCTGTTTAACTCCGTCAAGATCATCAGCCAGGGCTA
TGAGGCGCTGGTAGAACGTCTGGGCCGGTTTCACCGCAAGCTAACACCCGGGCTGCACGTCATTTTTCCTCCCATCGACA
GGATTGTGTTCCAGGAAACCATTCGCGAGAAGGTGTTGGACGTGCCGCCGCAGCAGTGCATCACCAGCGACAACGTTTCT
TTGATGGCGGATGCGGTGGTCTATTGGCGCATTACGGATATGATCAAGGCTCGCTATGCAGTAGAGGATGTACAGCGGGC
TTTGGTGAACTTGGTGCTGACGGCCCTGCGGGCCGAAATTGGCCGCATGGATCTAGATCAGACCTTCTCCTCCCGCGCCG
AGATCAACGCCCGCCTTTTGACAGAACTGGACGAGGCCACCGATCCCTGGGGGATCAAGATCACCCGCGTGGAAGTTCGA
GATATTCAGCCCTCCAAAACCGTGCAGGACTCGATGGAAAAGCAGATGGCTGCCGAGCGGGAGAAGCGAGCGGCCATTCT
CAAATCCGAGGGGGAGCAGCAGGCCAGCATCAACCAAGCGGCGGGGGCTGCCAAGGCGCAGTTGTTGCGAGCAGAAGCTG
AGAAGCGCGAGCGGCTGCTCCTAGCCGAGGGCACGGCTGAGGCCATCAAAACCATTGCCGCCACTTTGCAGGAAAACCCA
GAGGCAGCCAACGCGCTGCAATACTTGATGGCGCAAAACTACATCGATATGGGTCTCAAGGTGGGCAGTAGCCCCAGCTC
GAAGGTGATCTTTATGGATCCCAATTCCATCCCCGCTACTCTGCAAGGGTTGCTCTCTATGGTGGATGTGGCCAAGGGAG
AACAGGGATCCCGCGCTTCCGGGGCTTCCCAAAAGTTGGGCAGCTCCACGGCTTTCCCGACCGAGGTGAACTTTCCTCAG
CTCGACTAG

Upstream 100 bases:

>100_bases
AAGAGTCTCCGCCTTCAGGGGCCTCGAGGTCAAGGCCGACAAGCCCAGAGAACAATCGTCTAAGATAAGAGGCAAAGCTT
CCACTCAGGAGAGACGTCTT

Downstream 100 bases:

>100_bases
CAGCGACAGCTATGGTAGCTTCAAGGGATACCGCTTGGCTGCTGGTGGGGCAGGTGGTGGCTGCTCATGGACTGCGGGGC
TGGCTGCGGGTTAAGTGCTG

Product: HflC/HflK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MPGILAAIALIFLGYLFNSVKIISQGYEALVERLGRFHRKLTPGLHVIFPPIDRIVFQETIREKVLDVPPQQCITSDNVS
LMADAVVYWRITDMIKARYAVEDVQRALVNLVLTALRAEIGRMDLDQTFSSRAEINARLLTELDEATDPWGIKITRVEVR
DIQPSKTVQDSMEKQMAAEREKRAAILKSEGEQQASINQAAGAAKAQLLRAEAEKRERLLLAEGTAEAIKTIAATLQENP
EAANALQYLMAQNYIDMGLKVGSSPSSKVIFMDPNSIPATLQGLLSMVDVAKGEQGSRASGASQKLGSSTAFPTEVNFPQ
LD

Sequences:

>Translated_322_residues
MPGILAAIALIFLGYLFNSVKIISQGYEALVERLGRFHRKLTPGLHVIFPPIDRIVFQETIREKVLDVPPQQCITSDNVS
LMADAVVYWRITDMIKARYAVEDVQRALVNLVLTALRAEIGRMDLDQTFSSRAEINARLLTELDEATDPWGIKITRVEVR
DIQPSKTVQDSMEKQMAAEREKRAAILKSEGEQQASINQAAGAAKAQLLRAEAEKRERLLLAEGTAEAIKTIAATLQENP
EAANALQYLMAQNYIDMGLKVGSSPSSKVIFMDPNSIPATLQGLLSMVDVAKGEQGSRASGASQKLGSSTAFPTEVNFPQ
LD
>Mature_321_residues
PGILAAIALIFLGYLFNSVKIISQGYEALVERLGRFHRKLTPGLHVIFPPIDRIVFQETIREKVLDVPPQQCITSDNVSL
MADAVVYWRITDMIKARYAVEDVQRALVNLVLTALRAEIGRMDLDQTFSSRAEINARLLTELDEATDPWGIKITRVEVRD
IQPSKTVQDSMEKQMAAEREKRAAILKSEGEQQASINQAAGAAKAQLLRAEAEKRERLLLAEGTAEAIKTIAATLQENPE
AANALQYLMAQNYIDMGLKVGSSPSSKVIFMDPNSIPATLQGLLSMVDVAKGEQGSRASGASQKLGSSTAFPTEVNFPQL
D

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=297, Percent_Identity=38.3838383838384, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI221316744, Length=183, Percent_Identity=38.2513661202186, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI21686995, Length=183, Percent_Identity=38.2513661202186, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI38016911, Length=200, Percent_Identity=35, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI7657615, Length=191, Percent_Identity=24.6073298429319, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1786697, Length=292, Percent_Identity=40.0684931506849, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI1790617, Length=314, Percent_Identity=24.203821656051, Blast_Score=72, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI32564147, Length=250, Percent_Identity=38.4, Blast_Score=176, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17569493, Length=196, Percent_Identity=35.2040816326531, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI193209764, Length=196, Percent_Identity=35.2040816326531, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17569499, Length=183, Percent_Identity=36.6120218579235, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71987612, Length=180, Percent_Identity=37.2222222222222, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI25153583, Length=179, Percent_Identity=37.4301675977654, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71987621, Length=181, Percent_Identity=37.0165745856354, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71989948, Length=183, Percent_Identity=36.0655737704918, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71989955, Length=183, Percent_Identity=36.0655737704918, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI32566490, Length=183, Percent_Identity=33.879781420765, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17569497, Length=221, Percent_Identity=30.316742081448, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17570459, Length=190, Percent_Identity=33.6842105263158, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI193210507, Length=205, Percent_Identity=33.6585365853659, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17570161, Length=206, Percent_Identity=33.495145631068, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17542664, Length=181, Percent_Identity=31.4917127071823, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI45550506, Length=303, Percent_Identity=34.983498349835, Blast_Score=187, Evalue=6e-48,
Organism=Drosophila melanogaster, GI281365664, Length=198, Percent_Identity=35.3535353535354, Blast_Score=111, Evalue=7e-25,
Organism=Drosophila melanogaster, GI62484448, Length=198, Percent_Identity=35.3535353535354, Blast_Score=111, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24657857, Length=198, Percent_Identity=35.3535353535354, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI62484274, Length=198, Percent_Identity=35.3535353535354, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI45556022, Length=191, Percent_Identity=34.0314136125654, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI18860517, Length=182, Percent_Identity=32.967032967033, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21356845, Length=190, Percent_Identity=31.0526315789474, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28573263, Length=190, Percent_Identity=31.0526315789474, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281361631, Length=196, Percent_Identity=30.1020408163265, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI281361633, Length=196, Percent_Identity=30.1020408163265, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI281361635, Length=136, Percent_Identity=31.6176470588235, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 35353; Mature: 35222

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGILAAIALIFLGYLFNSVKIISQGYEALVERLGRFHRKLTPGLHVIFPPIDRIVFQET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
IREKVLDVPPQQCITSDNVSLMADAVVYWRITDMIKARYAVEDVQRALVNLVLTALRAEI
HHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRMDLDQTFSSRAEINARLLTELDEATDPWGIKITRVEVRDIQPSKTVQDSMEKQMAAER
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
EKRAAILKSEGEQQASINQAAGAAKAQLLRAEAEKRERLLLAEGTAEAIKTIAATLQENP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCC
EAANALQYLMAQNYIDMGLKVGSSPSSKVIFMDPNSIPATLQGLLSMVDVAKGEQGSRAS
CHHHHHHHHHHHHHHHHCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC
GASQKLGSSTAFPTEVNFPQLD
CCHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PGILAAIALIFLGYLFNSVKIISQGYEALVERLGRFHRKLTPGLHVIFPPIDRIVFQET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
IREKVLDVPPQQCITSDNVSLMADAVVYWRITDMIKARYAVEDVQRALVNLVLTALRAEI
HHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRMDLDQTFSSRAEINARLLTELDEATDPWGIKITRVEVRDIQPSKTVQDSMEKQMAAER
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
EKRAAILKSEGEQQASINQAAGAAKAQLLRAEAEKRERLLLAEGTAEAIKTIAATLQENP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCC
EAANALQYLMAQNYIDMGLKVGSSPSSKVIFMDPNSIPATLQGLLSMVDVAKGEQGSRAS
CHHHHHHHHHHHHHHHHCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC
GASQKLGSSTAFPTEVNFPQLD
CCHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]