| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is pncB [H]
Identifier: 86606186
GI number: 86606186
Start: 1531693
End: 1533054
Strand: Reverse
Name: pncB [H]
Synonym: CYA_1521
Alternate gene names: 86606186
Gene position: 1533054-1531693 (Counterclockwise)
Preceding gene: 86606189
Following gene: 86606185
Centisome position: 52.27
GC content: 65.2
Gene sequence:
>1362_bases ATGGTGAATTCAGACTTCTCCTCCCTGCAGCCCCAGGACTACGGCCTGTTGACGGATCTCTACCAGTTCACAATGGCTGC CTGCTATGTGGGGGAGGGGCTGGAGAATCAGCCGGCGGCCTTTGAGCTGTTTGTGCGGCGCTTGCCTAGCGACTATGGCT ACCTCATCGCCATGGGGCTGGCCCAAGCGGTGGAATACCTGCAGCAGTTGCACTTTCCGCCGCAAGCCTTGCAGGCGCTG CGGGAGACGGGCATTTTTGCCGAGGCACCGCAACGCTTCTGGGAGCTGCTGGCTAGCTGCCGCTTCGAGGGGGATGTGTG GGCAGTGCCGGAAGGAACGGCCGTTTTCGCCAACGAGCCGCTGCTGCGGGTAGAGGCTCCTCTGTGGCAGGCGCAACTGG TGGAAACCTACTTGCTGACCACCTTCAACTACCAAACCCTGATTGCCACCAAGGCGGCCCGCATGCGGGATGCTGCCGGG GATGAGGCCATTTTGTTGGAGTTCGGCACGCGGCGAGCCTTTAGCCCCCAGGCGGGCCTGTGGGCAGCGCGGGCAGCGCT GGCGGCGGGGTTCAACGCCACCTCCAACGTCTTGGCAGCTCTCAAGCTGGGGCGCAAGCCGGCAGGCACGATGGCCCATT CTCTGGTGATGGCCATTGCCGCCCTCTCCGGCGATGAGACCCGCGCTTTTCAAGCCTTCCGGCGCTACTTTCCCCAGGCG GTTCTGCTCATCGATACCTACGATCCCATCCAGGGAGCGCGCACAGCGGCCCAGCTCTTTGCAGCCACCCATCCGGATCA ACTGGGATCCCAAGGCGAGATCGGCGGCGTGCGCATCGACTCCGGGGACCTGGAGGCCCTCTCCCACCAGGTCAAGGCCA TCCTGCCCCAGGGGGCGCCGGTCTTTGTCAGCGGCGATTTGGACGAGTACGAGATCGAACGGCTGCACCGCTCCCAAGCC CCTATCAGCGGCTATGGAGTGGGGACGCGGCTGGTGACCGGCGAGGGCGTGAACGGAGTGTACAAATTGGTGGAGATTAA CGGGATCCCAGTGGCCAAGGCCTCCTTTGCCAAAGCCACCCTGCCGGGGCGCAAGCAGATCTTCCGCGGTCCCACAGGGG ACTTGCTCGGCCAGGCCGACGAGAGCCCGCCCCCTGGCTACCAGCCGCTGCTGCGCCCGATCCTGCGCAAGGGTGTGCTG TTGGAGCCCCTGCCGGATCTGGAGGCGATTGCCCGCACCAGCCGTGCCTCGGTCCTGCGCCTGCCCCAGGCAGTGCGGCA ACTGCGCCAGCCGGCTCCCTGGCCTATGGCCCTGACCCCTGCCCTGCAGCAGGTTAAGGATCGTCACCTGGGCTCTTCCT AA
Upstream 100 bases:
>100_bases CCCTGGCAGGCCAAACCTGTTACCATAGTAGCTCCAACTTTGGCAAGGACTTCTTTGCCCGCTCCCCTAGCTTTTCAGCG GCTTGTCCCTTGAGGTTTCC
Downstream 100 bases:
>100_bases GCAAGCAGAACCCCAGAGAAGGGGTTCCCGCTGCTCTATAATATTCTGGCTTTGGGGTTTCAGCTTTGCGAGTTTGTGCT TGGCAAGGCGCTGAAGTCCC
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase [H]
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MVNSDFSSLQPQDYGLLTDLYQFTMAACYVGEGLENQPAAFELFVRRLPSDYGYLIAMGLAQAVEYLQQLHFPPQALQAL RETGIFAEAPQRFWELLASCRFEGDVWAVPEGTAVFANEPLLRVEAPLWQAQLVETYLLTTFNYQTLIATKAARMRDAAG DEAILLEFGTRRAFSPQAGLWAARAALAAGFNATSNVLAALKLGRKPAGTMAHSLVMAIAALSGDETRAFQAFRRYFPQA VLLIDTYDPIQGARTAAQLFAATHPDQLGSQGEIGGVRIDSGDLEALSHQVKAILPQGAPVFVSGDLDEYEIERLHRSQA PISGYGVGTRLVTGEGVNGVYKLVEINGIPVAKASFAKATLPGRKQIFRGPTGDLLGQADESPPPGYQPLLRPILRKGVL LEPLPDLEAIARTSRASVLRLPQAVRQLRQPAPWPMALTPALQQVKDRHLGSS
Sequences:
>Translated_453_residues MVNSDFSSLQPQDYGLLTDLYQFTMAACYVGEGLENQPAAFELFVRRLPSDYGYLIAMGLAQAVEYLQQLHFPPQALQAL RETGIFAEAPQRFWELLASCRFEGDVWAVPEGTAVFANEPLLRVEAPLWQAQLVETYLLTTFNYQTLIATKAARMRDAAG DEAILLEFGTRRAFSPQAGLWAARAALAAGFNATSNVLAALKLGRKPAGTMAHSLVMAIAALSGDETRAFQAFRRYFPQA VLLIDTYDPIQGARTAAQLFAATHPDQLGSQGEIGGVRIDSGDLEALSHQVKAILPQGAPVFVSGDLDEYEIERLHRSQA PISGYGVGTRLVTGEGVNGVYKLVEINGIPVAKASFAKATLPGRKQIFRGPTGDLLGQADESPPPGYQPLLRPILRKGVL LEPLPDLEAIARTSRASVLRLPQAVRQLRQPAPWPMALTPALQQVKDRHLGSS >Mature_453_residues MVNSDFSSLQPQDYGLLTDLYQFTMAACYVGEGLENQPAAFELFVRRLPSDYGYLIAMGLAQAVEYLQQLHFPPQALQAL RETGIFAEAPQRFWELLASCRFEGDVWAVPEGTAVFANEPLLRVEAPLWQAQLVETYLLTTFNYQTLIATKAARMRDAAG DEAILLEFGTRRAFSPQAGLWAARAALAAGFNATSNVLAALKLGRKPAGTMAHSLVMAIAALSGDETRAFQAFRRYFPQA VLLIDTYDPIQGARTAAQLFAATHPDQLGSQGEIGGVRIDSGDLEALSHQVKAILPQGAPVFVSGDLDEYEIERLHRSQA PISGYGVGTRLVTGEGVNGVYKLVEINGIPVAKASFAKATLPGRKQIFRGPTGDLLGQADESPPPGYQPLLRPILRKGVL LEPLPDLEAIARTSRASVLRLPQAVRQLRQPAPWPMALTPALQQVKDRHLGSS
Specific function: Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN) [H]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Homo sapiens, GI194394158, Length=525, Percent_Identity=33.3333333333333, Blast_Score=188, Evalue=1e-47, Organism=Caenorhabditis elegans, GI71997952, Length=536, Percent_Identity=30.9701492537313, Blast_Score=198, Evalue=4e-51, Organism=Caenorhabditis elegans, GI71997947, Length=536, Percent_Identity=30.9701492537313, Blast_Score=198, Evalue=6e-51, Organism=Caenorhabditis elegans, GI71997955, Length=221, Percent_Identity=37.10407239819, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24581587, Length=519, Percent_Identity=30.2504816955684, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI161076680, Length=217, Percent_Identity=38.2488479262673, Blast_Score=128, Evalue=9e-30, Organism=Drosophila melanogaster, GI24581595, Length=217, Percent_Identity=38.2488479262673, Blast_Score=128, Evalue=9e-30, Organism=Drosophila melanogaster, GI28574709, Length=217, Percent_Identity=38.2488479262673, Blast_Score=128, Evalue=9e-30, Organism=Drosophila melanogaster, GI24581593, Length=217, Percent_Identity=38.2488479262673, Blast_Score=128, Evalue=9e-30, Organism=Drosophila melanogaster, GI24581591, Length=217, Percent_Identity=38.2488479262673, Blast_Score=128, Evalue=9e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR006405 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 49206; Mature: 49206
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNSDFSSLQPQDYGLLTDLYQFTMAACYVGEGLENQPAAFELFVRRLPSDYGYLIAMGL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH AQAVEYLQQLHFPPQALQALRETGIFAEAPQRFWELLASCRFEGDVWAVPEGTAVFANEP HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEECCCC LLRVEAPLWQAQLVETYLLTTFNYQTLIATKAARMRDAAGDEAILLEFGTRRAFSPQAGL CEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHH WAARAALAAGFNATSNVLAALKLGRKPAGTMAHSLVMAIAALSGDETRAFQAFRRYFPQA HHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCE VLLIDTYDPIQGARTAAQLFAATHPDQLGSQGEIGGVRIDSGDLEALSHQVKAILPQGAP EEEEECCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCC VFVSGDLDEYEIERLHRSQAPISGYGVGTRLVTGEGVNGVYKLVEINGIPVAKASFAKAT EEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHCC LPGRKQIFRGPTGDLLGQADESPPPGYQPLLRPILRKGVLLEPLPDLEAIARTSRASVLR CCCHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LPQAVRQLRQPAPWPMALTPALQQVKDRHLGSS HHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCC >Mature Secondary Structure MVNSDFSSLQPQDYGLLTDLYQFTMAACYVGEGLENQPAAFELFVRRLPSDYGYLIAMGL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH AQAVEYLQQLHFPPQALQALRETGIFAEAPQRFWELLASCRFEGDVWAVPEGTAVFANEP HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEECCCC LLRVEAPLWQAQLVETYLLTTFNYQTLIATKAARMRDAAGDEAILLEFGTRRAFSPQAGL CEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHH WAARAALAAGFNATSNVLAALKLGRKPAGTMAHSLVMAIAALSGDETRAFQAFRRYFPQA HHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCE VLLIDTYDPIQGARTAAQLFAATHPDQLGSQGEIGGVRIDSGDLEALSHQVKAILPQGAP EEEEECCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCC VFVSGDLDEYEIERLHRSQAPISGYGVGTRLVTGEGVNGVYKLVEINGIPVAKASFAKAT EEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHCC LPGRKQIFRGPTGDLLGQADESPPPGYQPLLRPILRKGVLLEPLPDLEAIARTSRASVLR CCCHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LPQAVRQLRQPAPWPMALTPALQQVKDRHLGSS HHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]