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The map label for this gene is nifU [H]

Identifier: 86606170

GI number: 86606170

Start: 1511145

End: 1511633

Strand: Reverse

Name: nifU [H]

Synonym: CYA_1503

Alternate gene names: 86606170

Gene position: 1511633-1511145 (Counterclockwise)

Preceding gene: 86606171

Following gene: 86606169

Centisome position: 51.54

GC content: 61.55

Gene sequence:

>489_bases
ATGCCTCTCGACAACCTGCGCGGACTTTATCAGCAAGTCATCCTGGAACGCTACAGAAAGCCCCGCAACTTCGGCAGGGT
CGATCCGGTTCATCGTCGCCAACGCGGCCATAACCCCTCCTGTGGCGACACCATCGACCTCACCTTGCAATTGGATCCCG
GCCAGGAGCGGATTGCCGATATCAAATTTGAGGGAGAGGGCTGCGCCATTGCCCTGGCTTCTGCCGATCTTATGGCCGAT
GCCGTGCGCGGGCGCACCATCCCCGAAGCGCTGCAGTTGGTCGAGCGCTTCCAGGCCATGATGCGCGGCGGCGAAGAGTT
TCCGCGGGAGTACCGCTCCCTCAATGCCATGAAGGGAGTTGCCCAGTTCCCGGTACGCATCAAGTGCGCCAACCTGGCCT
GGCATGCCCTCAAACACGCCCTGGAATCGCCCGCACCCAGTGGATCCCCGGACAACCCAGGTTTTGTGAGCAACGAAGAC
GCCGACTAG

Upstream 100 bases:

>100_bases
TTAGTTAGCTTGGGCCTAGCCAGATTGGCCGGAAGGAGCCGTAGCCCCTGGAGGGTGGGGATAGGGCTCTGGCCCAAGCA
GCGACCAAGCGGGAACGACA

Downstream 100 bases:

>100_bases
GTTCCGACCTCCGGGCGGCAATGGAGGGGATCCCTGTAATCCAGAGAACTCCTGGGATCAGGGATGCCCGGGCTGCCTCT
TTGCTCGGCTGGGAGCCAAT

Product: NifU family SUF system FeS assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MPLDNLRGLYQQVILERYRKPRNFGRVDPVHRRQRGHNPSCGDTIDLTLQLDPGQERIADIKFEGEGCAIALASADLMAD
AVRGRTIPEALQLVERFQAMMRGGEEFPREYRSLNAMKGVAQFPVRIKCANLAWHALKHALESPAPSGSPDNPGFVSNED
AD

Sequences:

>Translated_162_residues
MPLDNLRGLYQQVILERYRKPRNFGRVDPVHRRQRGHNPSCGDTIDLTLQLDPGQERIADIKFEGEGCAIALASADLMAD
AVRGRTIPEALQLVERFQAMMRGGEEFPREYRSLNAMKGVAQFPVRIKCANLAWHALKHALESPAPSGSPDNPGFVSNED
AD
>Mature_161_residues
PLDNLRGLYQQVILERYRKPRNFGRVDPVHRRQRGHNPSCGDTIDLTLQLDPGQERIADIKFEGEGCAIALASADLMADA
VRGRTIPEALQLVERFQAMMRGGEEFPREYRSLNAMKGVAQFPVRIKCANLAWHALKHALESPAPSGSPDNPGFVSNEDA
D

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI56699456, Length=136, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 18052; Mature: 17921

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLDNLRGLYQQVILERYRKPRNFGRVDPVHRRQRGHNPSCGDTIDLTLQLDPGQERIAD
CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEECCCHHHHEE
IKFEGEGCAIALASADLMADAVRGRTIPEALQLVERFQAMMRGGEEFPREYRSLNAMKGV
EEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AQFPVRIKCANLAWHALKHALESPAPSGSPDNPGFVSNEDAD
HHCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLDNLRGLYQQVILERYRKPRNFGRVDPVHRRQRGHNPSCGDTIDLTLQLDPGQERIAD
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEECCCHHHHEE
IKFEGEGCAIALASADLMADAVRGRTIPEALQLVERFQAMMRGGEEFPREYRSLNAMKGV
EEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AQFPVRIKCANLAWHALKHALESPAPSGSPDNPGFVSNEDAD
HHCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]