| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606169
Identifier: 86606169
GI number: 86606169
Start: 1510605
End: 1510952
Strand: Reverse
Name: 86606169
Synonym: CYA_1502
Alternate gene names: NA
Gene position: 1510952-1510605 (Counterclockwise)
Preceding gene: 86606170
Following gene: 86606168
Centisome position: 51.52
GC content: 53.16
Gene sequence:
>348_bases GTGGGATCCCCGCCGCTATCCGCCAAATGGCGTAGAAAAATCCTAGAAATCGCGTACGTGGATTCTCGGTGTTTTCCGTT TTTTTACGGATATTTGGGCTATGATGGGGACGTAAACGTTGGAAATGCGGAGGAAATACAGATGCAAGCTGGTGTAGATC TAACGCTAGATTACCGTACTTACCGCTTGGCGGCGTTGCTGAGCGAGCACTTTCCCATGGGGGAGCTACTGGGGGTTTCC CTCAAGTGGCAGGACGATGCTTCTGCTGTAGACAAGCTGCAGACTGAGGTCGCCCGTTCCTGGAGGGAGCAGATCGAGCA GCGCTATCTCGTTCCTCGGCACAAGTAA
Upstream 100 bases:
>100_bases GAGCCAATGACCTCACCAGCAAGCCCTTCAACGCCGCCACCCTGGCCGCCGCAACCGCGGCTCTGCTGAGCTGGGATCCC TGAACTCACCCCACAGCTCC
Downstream 100 bases:
>100_bases TCGGGAACTCTCGAACGAACCCTCTCAAACGGAAACGACCATGAATGCCTCTTTGAATTCTCTCCCTGTTGCTCCGGCCC TTAGTATCGAAGCAATCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MGSPPLSAKWRRKILEIAYVDSRCFPFFYGYLGYDGDVNVGNAEEIQMQAGVDLTLDYRTYRLAALLSEHFPMGELLGVS LKWQDDASAVDKLQTEVARSWREQIEQRYLVPRHK
Sequences:
>Translated_115_residues MGSPPLSAKWRRKILEIAYVDSRCFPFFYGYLGYDGDVNVGNAEEIQMQAGVDLTLDYRTYRLAALLSEHFPMGELLGVS LKWQDDASAVDKLQTEVARSWREQIEQRYLVPRHK >Mature_114_residues GSPPLSAKWRRKILEIAYVDSRCFPFFYGYLGYDGDVNVGNAEEIQMQAGVDLTLDYRTYRLAALLSEHFPMGELLGVSL KWQDDASAVDKLQTEVARSWREQIEQRYLVPRHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13287; Mature: 13156
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSPPLSAKWRRKILEIAYVDSRCFPFFYGYLGYDGDVNVGNAEEIQMQAGVDLTLDYRT CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHEEEECCCEEEECHHH YRLAALLSEHFPMGELLGVSLKWQDDASAVDKLQTEVARSWREQIEQRYLVPRHK HHHHHHHHHCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GSPPLSAKWRRKILEIAYVDSRCFPFFYGYLGYDGDVNVGNAEEIQMQAGVDLTLDYRT CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHEEEECCCEEEECHHH YRLAALLSEHFPMGELLGVSLKWQDDASAVDKLQTEVARSWREQIEQRYLVPRHK HHHHHHHHHCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA