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The map label for this gene is clpS

Identifier: 86606056

GI number: 86606056

Start: 1392525

End: 1392830

Strand: Reverse

Name: clpS

Synonym: CYA_1385

Alternate gene names: 86606056

Gene position: 1392830-1392525 (Counterclockwise)

Preceding gene: 86606057

Following gene: 86606054

Centisome position: 47.49

GC content: 61.44

Gene sequence:

>306_bases
ATGACCACGGAAGCTCCCACTCGACCTGCTCAGCAGTCGTCTCCGTCGAGAACCCGGGTTCGCCAGCCCTACCCCCACTT
CAAGGTGATCGTCTTGGATGACGATTTCAACACCTTTCAGCATGTTACCGAATGCTTGCTCAAGTACATCCCCGGCATGA
CCCTGCCCCTGGCACGGCAACTGACCGTGCAGGTGGATGCCGAAGGGCAGGCGGTGGTTTGGGTCGGCCCGCAAGAGCAA
GCAGAGCTCTACCATCAACAGTTGCTGCGGGAGGGCCTGACGATGGCCCCCCTGGAGCCGGCCTGA

Upstream 100 bases:

>100_bases
GGAACTAGAATGGACTCAGAATCAACAGCGACCGATTTTTGGCTGTTGAGAAAGTTGAATGTGACCTAGGTATCCAGATG
TTGTCCTGAGTTCTGCTGCT

Downstream 100 bases:

>100_bases
AGCACGAGCTGCTCGTAGCTGCGCTCAACGGCGGCCAGTAGCTCTGCCTGGCCCCAGCCGGCATAGAGGCTGCTGACAAT
GGCCAGCCCACCCGCCCCCA

Product: ATP-dependent Clp protease adaptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTTEAPTRPAQQSSPSRTRVRQPYPHFKVIVLDDDFNTFQHVTECLLKYIPGMTLPLARQLTVQVDAEGQAVVWVGPQEQ
AELYHQQLLREGLTMAPLEPA

Sequences:

>Translated_101_residues
MTTEAPTRPAQQSSPSRTRVRQPYPHFKVIVLDDDFNTFQHVTECLLKYIPGMTLPLARQLTVQVDAEGQAVVWVGPQEQ
AELYHQQLLREGLTMAPLEPA
>Mature_100_residues
TTEAPTRPAQQSSPSRTRVRQPYPHFKVIVLDDDFNTFQHVTECLLKYIPGMTLPLARQLTVQVDAEGQAVVWVGPQEQA
ELYHQQLLREGLTMAPLEPA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 11427; Mature: 11296

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEAPTRPAQQSSPSRTRVRQPYPHFKVIVLDDDFNTFQHVTECLLKYIPGMTLPLARQ
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCE
LTVQVDAEGQAVVWVGPQEQAELYHQQLLREGLTMAPLEPA
EEEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TTEAPTRPAQQSSPSRTRVRQPYPHFKVIVLDDDFNTFQHVTECLLKYIPGMTLPLARQ
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCE
LTVQVDAEGQAVVWVGPQEQAELYHQQLLREGLTMAPLEPA
EEEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]