| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is fur [H]
Identifier: 86606053
GI number: 86606053
Start: 1390490
End: 1390939
Strand: Reverse
Name: fur [H]
Synonym: CYA_1383
Alternate gene names: 86606053
Gene position: 1390939-1390490 (Counterclockwise)
Preceding gene: 86606054
Following gene: 86606052
Centisome position: 47.43
GC content: 59.11
Gene sequence:
>450_bases ATGTCCTCCTCCCGCCAGACCCGCAGCCAAAAACTGATCCTGGAAGTCTTGAAGCAGAGCTTGCGGCCCCTCTCGGCCCA AGAGATCTTCCTGGAGTTGCGCAATGCCAACCATAGCGTTGGCTTGGCCACGGTCTACCGGGCTTTGGAGGCTCTGCGCA ACGAGGGCAAGCTGCAAGCGGTCAACTTGGGAGATCAGCAGACCTACTATCAGGTTTTGCCCAGCAACGGCCACAACCGC CATCACCTCATTTGCACCGAATGTCGGCGGGTGGTGCCTCTGCCGGATTGCCCAGTGGGAGACCTGGAGGAGCAGCTTGC CAGCCGCTACCAATTTGTCATCGAGTACCATGTGCTTGACTTCTACGGCATCTGCGCCGAATGCCGTGGGGAGAGCAGCT CCAACCCTGGCTCACAGCGATCCTCTTGCCTTGAGGCCAAACCGCAATGA
Upstream 100 bases:
>100_bases CAAATGTTCGACCAAATGCACCAAACCCTAGAGCGCATGAAAGCCGAGGCCGACGCCGAGCGCTAACCTTGCTGGTGACC CCTCAGAACGAAAAGGGATC
Downstream 100 bases:
>100_bases TGAACTATCTCTGGACGCTGTTGATCGGATTGGCGGGCGCCCTGATTGCAGTCAAGCTGAGGCTGCCGGCAGGAGCTTTG GTGGGTTCGATGGTAGCAGT
Product: FUR family transcriptional regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSSSRQTRSQKLILEVLKQSLRPLSAQEIFLELRNANHSVGLATVYRALEALRNEGKLQAVNLGDQQTYYQVLPSNGHNR HHLICTECRRVVPLPDCPVGDLEEQLASRYQFVIEYHVLDFYGICAECRGESSSNPGSQRSSCLEAKPQ
Sequences:
>Translated_149_residues MSSSRQTRSQKLILEVLKQSLRPLSAQEIFLELRNANHSVGLATVYRALEALRNEGKLQAVNLGDQQTYYQVLPSNGHNR HHLICTECRRVVPLPDCPVGDLEEQLASRYQFVIEYHVLDFYGICAECRGESSSNPGSQRSSCLEAKPQ >Mature_148_residues SSSRQTRSQKLILEVLKQSLRPLSAQEIFLELRNANHSVGLATVYRALEALRNEGKLQAVNLGDQQTYYQVLPSNGHNRH HLICTECRRVVPLPDCPVGDLEEQLASRYQFVIEYHVLDFYGICAECRGESSSNPGSQRSSCLEAKPQ
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=129, Percent_Identity=28.6821705426357, Blast_Score=64, Evalue=5e-12,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16801; Mature: 16670
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSRQTRSQKLILEVLKQSLRPLSAQEIFLELRNANHSVGLATVYRALEALRNEGKLQA CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEE VNLGDQQTYYQVLPSNGHNRHHLICTECRRVVPLPDCPVGDLEEQLASRYQFVIEYHVLD ECCCCCCCEEEECCCCCCCCCCEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FYGICAECRGESSSNPGSQRSSCLEAKPQ HHHHHHHHCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure SSSRQTRSQKLILEVLKQSLRPLSAQEIFLELRNANHSVGLATVYRALEALRNEGKLQA CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEE VNLGDQQTYYQVLPSNGHNRHHLICTECRRVVPLPDCPVGDLEEQLASRYQFVIEYHVLD ECCCCCCCEEEECCCCCCCCCCEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FYGICAECRGESSSNPGSQRSSCLEAKPQ HHHHHHHHCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]