| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606024
Identifier: 86606024
GI number: 86606024
Start: 1362669
End: 1362881
Strand: Reverse
Name: 86606024
Synonym: CYA_1351
Alternate gene names: NA
Gene position: 1362881-1362669 (Counterclockwise)
Preceding gene: 86606025
Following gene: 86606021
Centisome position: 46.47
GC content: 63.38
Gene sequence:
>213_bases TTGGCCTTGTCTATGTCCGATGAGCTGCTGCGTGCAATCCGCAGACGCGACCTAGAGGCCGCCACCTCAGCCGTGCAGCG CTTGCGTTCCCGCCACCTGAGCGAGGCTGTGATTACCTCGATGGTGATGGTGGCCGTGGAGCGACTGGCCTGGGATGAAG GCGATCGGGCTGCTGCCAGTTGGTTGCTACGTCACTGCTCCAGACGGCGCTGA
Upstream 100 bases:
>100_bases GAGATTTTGGGGAAGCCAGACAAACTTTTGCGTTATCTGACAAGAAGGTGAAGGAGAAGGGGAGGTTCTGGCTCCTGCGG TAGAAAGGTAGTGGGGCGAG
Downstream 100 bases:
>100_bases AGGGATCCGGGCCGAGCGAACGCCTAAAGCACCTGCTGCTCGCGGAGAACCTCGGCCAGCAACCCCGCCAGGGAAGCGGC GATCCCGACCATCGAACACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MALSMSDELLRAIRRRDLEAATSAVQRLRSRHLSEAVITSMVMVAVERLAWDEGDRAAASWLLRHCSRRR
Sequences:
>Translated_70_residues MALSMSDELLRAIRRRDLEAATSAVQRLRSRHLSEAVITSMVMVAVERLAWDEGDRAAASWLLRHCSRRR >Mature_69_residues ALSMSDELLRAIRRRDLEAATSAVQRLRSRHLSEAVITSMVMVAVERLAWDEGDRAAASWLLRHCSRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8035; Mature: 7904
Theoretical pI: Translated: 11.76; Mature: 11.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSMSDELLRAIRRRDLEAATSAVQRLRSRHLSEAVITSMVMVAVERLAWDEGDRAAAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH WLLRHCSRRR HHHHHHHCCC >Mature Secondary Structure ALSMSDELLRAIRRRDLEAATSAVQRLRSRHLSEAVITSMVMVAVERLAWDEGDRAAAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH WLLRHCSRRR HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA