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The map label for this gene is 86605912

Identifier: 86605912

GI number: 86605912

Start: 1240339

End: 1240980

Strand: Reverse

Name: 86605912

Synonym: CYA_1229

Alternate gene names: NA

Gene position: 1240980-1240339 (Counterclockwise)

Preceding gene: 86605913

Following gene: 86605909

Centisome position: 42.31

GC content: 60.44

Gene sequence:

>642_bases
ATGGCTCGTCTATCGCAAGAGCTGGCCCGATTTGCCTGCCTTCCCGCCCATCCAGAGCAGCCCGAGCCTTACCCAGAGGG
ATCCCCACCCATCCGCCTTGAAGAGATTCTCAAACTGGCGGGCGAGCGCAGCTTTGGCTTGTTTTTGGCGGTGCTCTCCT
TCCCTTCTGCTCTGCCTCTGCCAGCTCCTGGCTATTCCACTCCCTTTGGCGTGGTTATTCTGCTGCTGGCCCTACAAATG
CTGGCGGGGCGAACCACCCCCTGGCTGCCGCCATGGGTGCTGCAGACATCCATTGAACGGAAGCAATTTCAAAAGTGGGT
GCAGGCCGGGATCCCGTGGTTGCAGCGCATTGAAAAAGTTGCCTGCCCCCGTTGGCAACCAGTCTGCACCAGCCGCCTGG
GCCAGGTCTGGCTGAGCACCTTGATCAGCTTGATGGGTATTTCCATGATCATTCCCGTGCCCGGCACCAACACCCTGCCG
GCGATGGGGGTCTTCGTCACCGCCTTTGGCCTCCTCGAAGAGGACGGGATCCTGTGCAGCTTGGGATCCCTGATCTGTGT
GGCGGCGGGGCTGCTGACCACTTCCATTTTGGTGGGCCTGTGGCTGGGGGGAACGACTCTGTTGGATTGGCTGAGAAGAT
AG

Upstream 100 bases:

>100_bases
TCTTACCCCTCCAAGACCACCCCTTTGTTCAAGATATCCAACAAACCTTGGATTTGCAGTAGGCTATCGTTGGCTCCCAA
ACCGTTTGCAGCCCCCCCCT

Downstream 100 bases:

>100_bases
CCTTTTGCCCTCACTCCCAACCCCGGCCCCCCCTATATCCCCCCGTGTACGGGGGGATACGGAGTTGGGGATCGAGGCAA
CGCCCAGCTTCACCGATGGA

Product: ExoD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MARLSQELARFACLPAHPEQPEPYPEGSPPIRLEEILKLAGERSFGLFLAVLSFPSALPLPAPGYSTPFGVVILLLALQM
LAGRTTPWLPPWVLQTSIERKQFQKWVQAGIPWLQRIEKVACPRWQPVCTSRLGQVWLSTLISLMGISMIIPVPGTNTLP
AMGVFVTAFGLLEEDGILCSLGSLICVAAGLLTTSILVGLWLGGTTLLDWLRR

Sequences:

>Translated_213_residues
MARLSQELARFACLPAHPEQPEPYPEGSPPIRLEEILKLAGERSFGLFLAVLSFPSALPLPAPGYSTPFGVVILLLALQM
LAGRTTPWLPPWVLQTSIERKQFQKWVQAGIPWLQRIEKVACPRWQPVCTSRLGQVWLSTLISLMGISMIIPVPGTNTLP
AMGVFVTAFGLLEEDGILCSLGSLICVAAGLLTTSILVGLWLGGTTLLDWLRR
>Mature_212_residues
ARLSQELARFACLPAHPEQPEPYPEGSPPIRLEEILKLAGERSFGLFLAVLSFPSALPLPAPGYSTPFGVVILLLALQML
AGRTTPWLPPWVLQTSIERKQFQKWVQAGIPWLQRIEKVACPRWQPVCTSRLGQVWLSTLISLMGISMIIPVPGTNTLPA
MGVFVTAFGLLEEDGILCSLGSLICVAAGLLTTSILVGLWLGGTTLLDWLRR

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 23281; Mature: 23150

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLSQELARFACLPAHPEQPEPYPEGSPPIRLEEILKLAGERSFGLFLAVLSFPSALPL
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PAPGYSTPFGVVILLLALQMLAGRTTPWLPPWVLQTSIERKQFQKWVQAGIPWLQRIEKV
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ACPRWQPVCTSRLGQVWLSTLISLMGISMIIPVPGTNTLPAMGVFVTAFGLLEEDGILCS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCHHHH
LGSLICVAAGLLTTSILVGLWLGGTTLLDWLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ARLSQELARFACLPAHPEQPEPYPEGSPPIRLEEILKLAGERSFGLFLAVLSFPSALPL
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PAPGYSTPFGVVILLLALQMLAGRTTPWLPPWVLQTSIERKQFQKWVQAGIPWLQRIEKV
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ACPRWQPVCTSRLGQVWLSTLISLMGISMIIPVPGTNTLPAMGVFVTAFGLLEEDGILCS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCHHHH
LGSLICVAAGLLTTSILVGLWLGGTTLLDWLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]