Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605874

Identifier: 86605874

GI number: 86605874

Start: 1201814

End: 1202182

Strand: Reverse

Name: 86605874

Synonym: CYA_1187

Alternate gene names: NA

Gene position: 1202182-1201814 (Counterclockwise)

Preceding gene: 86605878

Following gene: 86605873

Centisome position: 40.99

GC content: 60.7

Gene sequence:

>369_bases
ATGAAAGAGCCGGCTGCCGCTTTTCGAGATAGCCTGCTGATGTACTCTTTCATCTGGGCCGTGCTGGCGATAGGGTGTTT
TCAAGTCTTGCCACGCCTGGAAATTGCCTCTGCTGCCCAGTTGCAGCCGTGGCTGGGGCCCGCCTATCTGGCTGGGCTGG
GTGGATCCCTGTTGGCGGCTTTGGGATCGATGTTGGCCGTCTTGGCAGAAACAGCCGCGGGCGCTGCCAGCAAAAGACAC
CTGCATCGCCTAGCTTGGGCGCTGGGGACGGTCGGTTTTCTCGGCGTCCTCTTTCCCTTGGGCTTGGCCAGCGTCTTTTT
TCTCAGGGCCGCCCAGTCCACCGACTGGTGGCAGAAGCTGTTGGACTGA

Upstream 100 bases:

>100_bases
GGTTTTCAGGTTTCAGGAGAGTTGGGGCAGATGGGTTAGGATCCCTGTCAAGCCAGAAGTTGGGTTTTGCTGCATACTCA
TCCCCAATTGGGCTGGGATC

Downstream 100 bases:

>100_bases
GGCTCACTCAGCAACCATTTTTTTGACAAATGCGTCGAGGTTAGGGGTACGATAAGGACAAGTTCCGTTCTTTATCCAGA
GCAGACTGAGGGATCAGGCC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKEPAAAFRDSLLMYSFIWAVLAIGCFQVLPRLEIASAAQLQPWLGPAYLAGLGGSLLAALGSMLAVLAETAAGAASKRH
LHRLAWALGTVGFLGVLFPLGLASVFFLRAAQSTDWWQKLLD

Sequences:

>Translated_122_residues
MKEPAAAFRDSLLMYSFIWAVLAIGCFQVLPRLEIASAAQLQPWLGPAYLAGLGGSLLAALGSMLAVLAETAAGAASKRH
LHRLAWALGTVGFLGVLFPLGLASVFFLRAAQSTDWWQKLLD
>Mature_122_residues
MKEPAAAFRDSLLMYSFIWAVLAIGCFQVLPRLEIASAAQLQPWLGPAYLAGLGGSLLAALGSMLAVLAETAAGAASKRH
LHRLAWALGTVGFLGVLFPLGLASVFFLRAAQSTDWWQKLLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13014; Mature: 13014

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEPAAAFRDSLLMYSFIWAVLAIGCFQVLPRLEIASAAQLQPWLGPAYLAGLGGSLLAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHH
LGSMLAVLAETAAGAASKRHLHRLAWALGTVGFLGVLFPLGLASVFFLRAAQSTDWWQKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LD
CC
>Mature Secondary Structure
MKEPAAAFRDSLLMYSFIWAVLAIGCFQVLPRLEIASAAQLQPWLGPAYLAGLGGSLLAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHH
LGSMLAVLAETAAGAASKRHLHRLAWALGTVGFLGVLFPLGLASVFFLRAAQSTDWWQKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA