| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605874
Identifier: 86605874
GI number: 86605874
Start: 1201814
End: 1202182
Strand: Reverse
Name: 86605874
Synonym: CYA_1187
Alternate gene names: NA
Gene position: 1202182-1201814 (Counterclockwise)
Preceding gene: 86605878
Following gene: 86605873
Centisome position: 40.99
GC content: 60.7
Gene sequence:
>369_bases ATGAAAGAGCCGGCTGCCGCTTTTCGAGATAGCCTGCTGATGTACTCTTTCATCTGGGCCGTGCTGGCGATAGGGTGTTT TCAAGTCTTGCCACGCCTGGAAATTGCCTCTGCTGCCCAGTTGCAGCCGTGGCTGGGGCCCGCCTATCTGGCTGGGCTGG GTGGATCCCTGTTGGCGGCTTTGGGATCGATGTTGGCCGTCTTGGCAGAAACAGCCGCGGGCGCTGCCAGCAAAAGACAC CTGCATCGCCTAGCTTGGGCGCTGGGGACGGTCGGTTTTCTCGGCGTCCTCTTTCCCTTGGGCTTGGCCAGCGTCTTTTT TCTCAGGGCCGCCCAGTCCACCGACTGGTGGCAGAAGCTGTTGGACTGA
Upstream 100 bases:
>100_bases GGTTTTCAGGTTTCAGGAGAGTTGGGGCAGATGGGTTAGGATCCCTGTCAAGCCAGAAGTTGGGTTTTGCTGCATACTCA TCCCCAATTGGGCTGGGATC
Downstream 100 bases:
>100_bases GGCTCACTCAGCAACCATTTTTTTGACAAATGCGTCGAGGTTAGGGGTACGATAAGGACAAGTTCCGTTCTTTATCCAGA GCAGACTGAGGGATCAGGCC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKEPAAAFRDSLLMYSFIWAVLAIGCFQVLPRLEIASAAQLQPWLGPAYLAGLGGSLLAALGSMLAVLAETAAGAASKRH LHRLAWALGTVGFLGVLFPLGLASVFFLRAAQSTDWWQKLLD
Sequences:
>Translated_122_residues MKEPAAAFRDSLLMYSFIWAVLAIGCFQVLPRLEIASAAQLQPWLGPAYLAGLGGSLLAALGSMLAVLAETAAGAASKRH LHRLAWALGTVGFLGVLFPLGLASVFFLRAAQSTDWWQKLLD >Mature_122_residues MKEPAAAFRDSLLMYSFIWAVLAIGCFQVLPRLEIASAAQLQPWLGPAYLAGLGGSLLAALGSMLAVLAETAAGAASKRH LHRLAWALGTVGFLGVLFPLGLASVFFLRAAQSTDWWQKLLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13014; Mature: 13014
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEPAAAFRDSLLMYSFIWAVLAIGCFQVLPRLEIASAAQLQPWLGPAYLAGLGGSLLAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHH LGSMLAVLAETAAGAASKRHLHRLAWALGTVGFLGVLFPLGLASVFFLRAAQSTDWWQKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LD CC >Mature Secondary Structure MKEPAAAFRDSLLMYSFIWAVLAIGCFQVLPRLEIASAAQLQPWLGPAYLAGLGGSLLAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHH LGSMLAVLAETAAGAASKRHLHRLAWALGTVGFLGVLFPLGLASVFFLRAAQSTDWWQKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA