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The map label for this gene is secY

Identifier: 86605848

GI number: 86605848

Start: 1182474

End: 1183772

Strand: Reverse

Name: secY

Synonym: CYA_1160

Alternate gene names: 86605848

Gene position: 1183772-1182474 (Counterclockwise)

Preceding gene: 86605849

Following gene: 86605847

Centisome position: 40.36

GC content: 59.05

Gene sequence:

>1299_bases
ATGGCTGACTCACGAGGCTCCGCTCCCTCCGCCCAAGAGACCTTCATGCAGATGGCCATGGCTTCTGGCCTGCGCAGACG
TCTGTTTCTTACCCTAGGCCTGTTGCTGTTGGTGCGGCTGGGCATTTACATTCCCATCCCCAGTATTGACCGAGCTCGCT
TTGCCGCCGAAGCCGCCAACAGTCCTGTGTTTGGCTTTCTGGATGTCTTCTCGGGCGGCGGTATCTCCGCTTTGGGGATC
TTCGCCCTCGGCATCCTGCCTTTCATCAACGCCTCCATCATCATGCAACTGCTGGTCTCGGCCATTCCGGCCCTGGAGAA
CCTGCAGAAAAACGAGGGGGAGCAGGGGCGGCGACAGATTTCCCAGTACACCCGCTACGTTACCCTGATTTGGGCCATCA
TCCAGGGCATCGGCATCTCCTTCTGGGTGCGGGAGTTCGCCAACACCAGCAACGAGTTGGCCTTTGTGGCCTCCACCACC
CTGGCCCTGACGGCAGGTTCCATGTTTGTCATGTGGTTGGGGGAGATGATCACGGAGAAGGGGGTGGGCAGTGGGCCGTC
GCTGTTGATCTTCGTCAACATTGTCGCCACGCTGCCCCGCGCTCTGGGCCAGACCATCAGCCTAGCCCGTGCTGATAGCA
GCACCATCGGCGGCATCTTGGTGTTGATGGCCGTCTTCCTAGCCACCATTGTCGGCATTGTCTTCGTCCAGGAGGGCAGC
CGCAAAATCCCTATTGTCTACGCCAAGCGCCAGGTGGGCAACAAGCTATTCCGTGAGCAGAAGAGCTACCTGCCCCTGCG
GCTAAACCAGGGGGGCGTGATGCCGATCATCTTTGCCTACTCGGTGATGTCCCTGCCCTTTGCCTTGGCCCAGTACACCC
AGAACCTGACTTTGGTGCAGGTGGCCAACCTTTTGGCCCCTACCTCTTGGTTTTACATTCCCTTCTACTTCGTGCTGATC
CTCCTCTTCAGCTATTTCTACGCCTCTTTGATCATTAACCCGGTGGATCTGGCGCAGAACCTGAAGAAGATGGGGGCCAG
CATTCCGGGAGTCCGCCCGGGCAAGGCCACTGCTGAGTACATCGAAGGGATCCTCAACCGGCTGACCCTGCTGGGGGCCT
TGTTCTTGTGTGCGGTGGCCATCATCCCGACGACGGTGGAGCGGGCGACCGGCATCACCACTTTTCAGGGCTTGGGGGCA
ACTTCGCTGCTGATCCTGGTGGGGGTGGCGATCGAGACCTCCAAACAGATCCAGACCTACGTCATTTCGCAGCGTTACGA
AGGGATGGTCAAGCAATAG

Upstream 100 bases:

>100_bases
TGCAGTTTGCAGCTTCTCTATTTTGCCGACTTTCCCACCGGCAGCGTAGAGTGGTAAATAGCTCACCTTGCCTTTCCCTT
CCGCGAGGTTTTCTAGATTT

Downstream 100 bases:

>100_bases
TGCCGAGGTTAATCTTTTTGGGGCCGCCGGGAGCGGGCAAGGGCACCCAGGCAGAGCGGCTGGCAGCGATCTACCACACG
CCCAAAATTTCTACAGGCGA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MADSRGSAPSAQETFMQMAMASGLRRRLFLTLGLLLLVRLGIYIPIPSIDRARFAAEAANSPVFGFLDVFSGGGISALGI
FALGILPFINASIIMQLLVSAIPALENLQKNEGEQGRRQISQYTRYVTLIWAIIQGIGISFWVREFANTSNELAFVASTT
LALTAGSMFVMWLGEMITEKGVGSGPSLLIFVNIVATLPRALGQTISLARADSSTIGGILVLMAVFLATIVGIVFVQEGS
RKIPIVYAKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAYSVMSLPFALAQYTQNLTLVQVANLLAPTSWFYIPFYFVLI
LLFSYFYASLIINPVDLAQNLKKMGASIPGVRPGKATAEYIEGILNRLTLLGALFLCAVAIIPTTVERATGITTFQGLGA
TSLLILVGVAIETSKQIQTYVISQRYEGMVKQ

Sequences:

>Translated_432_residues
MADSRGSAPSAQETFMQMAMASGLRRRLFLTLGLLLLVRLGIYIPIPSIDRARFAAEAANSPVFGFLDVFSGGGISALGI
FALGILPFINASIIMQLLVSAIPALENLQKNEGEQGRRQISQYTRYVTLIWAIIQGIGISFWVREFANTSNELAFVASTT
LALTAGSMFVMWLGEMITEKGVGSGPSLLIFVNIVATLPRALGQTISLARADSSTIGGILVLMAVFLATIVGIVFVQEGS
RKIPIVYAKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAYSVMSLPFALAQYTQNLTLVQVANLLAPTSWFYIPFYFVLI
LLFSYFYASLIINPVDLAQNLKKMGASIPGVRPGKATAEYIEGILNRLTLLGALFLCAVAIIPTTVERATGITTFQGLGA
TSLLILVGVAIETSKQIQTYVISQRYEGMVKQ
>Mature_431_residues
ADSRGSAPSAQETFMQMAMASGLRRRLFLTLGLLLLVRLGIYIPIPSIDRARFAAEAANSPVFGFLDVFSGGGISALGIF
ALGILPFINASIIMQLLVSAIPALENLQKNEGEQGRRQISQYTRYVTLIWAIIQGIGISFWVREFANTSNELAFVASTTL
ALTAGSMFVMWLGEMITEKGVGSGPSLLIFVNIVATLPRALGQTISLARADSSTIGGILVLMAVFLATIVGIVFVQEGSR
KIPIVYAKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAYSVMSLPFALAQYTQNLTLVQVANLLAPTSWFYIPFYFVLIL
LFSYFYASLIINPVDLAQNLKKMGASIPGVRPGKATAEYIEGILNRLTLLGALFLCAVAIIPTTVERATGITTFQGLGAT
SLLILVGVAIETSKQIQTYVISQRYEGMVKQ

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=420, Percent_Identity=41.1904761904762, Blast_Score=281, Evalue=8e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 46874; Mature: 46743

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSRGSAPSAQETFMQMAMASGLRRRLFLTLGLLLLVRLGIYIPIPSIDRARFAAEAAN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
SPVFGFLDVFSGGGISALGIFALGILPFINASIIMQLLVSAIPALENLQKNEGEQGRRQI
CCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SQYTRYVTLIWAIIQGIGISFWVREFANTSNELAFVASTTLALTAGSMFVMWLGEMITEK
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHC
GVGSGPSLLIFVNIVATLPRALGQTISLARADSSTIGGILVLMAVFLATIVGIVFVQEGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
RKIPIVYAKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAYSVMSLPFALAQYTQNLTLVQ
CCCCEEEHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
VANLLAPTSWFYIPFYFVLILLFSYFYASLIINPVDLAQNLKKMGASIPGVRPGKATAEY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
IEGILNRLTLLGALFLCAVAIIPTTVERATGITTFQGLGATSLLILVGVAIETSKQIQTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
VISQRYEGMVKQ
HHHHHHHHCCCC
>Mature Secondary Structure 
ADSRGSAPSAQETFMQMAMASGLRRRLFLTLGLLLLVRLGIYIPIPSIDRARFAAEAAN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
SPVFGFLDVFSGGGISALGIFALGILPFINASIIMQLLVSAIPALENLQKNEGEQGRRQI
CCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SQYTRYVTLIWAIIQGIGISFWVREFANTSNELAFVASTTLALTAGSMFVMWLGEMITEK
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHC
GVGSGPSLLIFVNIVATLPRALGQTISLARADSSTIGGILVLMAVFLATIVGIVFVQEGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
RKIPIVYAKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAYSVMSLPFALAQYTQNLTLVQ
CCCCEEEHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
VANLLAPTSWFYIPFYFVLILLFSYFYASLIINPVDLAQNLKKMGASIPGVRPGKATAEY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
IEGILNRLTLLGALFLCAVAIIPTTVERATGITTFQGLGATSLLILVGVAIETSKQIQTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
VISQRYEGMVKQ
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1420358 [H]