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The map label for this gene is 86605835

Identifier: 86605835

GI number: 86605835

Start: 1170901

End: 1171863

Strand: Reverse

Name: 86605835

Synonym: CYA_1146

Alternate gene names: NA

Gene position: 1171863-1170901 (Counterclockwise)

Preceding gene: 86605836

Following gene: 86605832

Centisome position: 39.96

GC content: 62.72

Gene sequence:

>963_bases
GTGCTCACCACTCTTTTTCAGGTCTACCTCCCCCTGCTGGGCTGGACGCTGCTGGGGTTTGTCCTGCAGAGAGGGCTACC
TCCCCCCTGGCGCCATTGGCTAAATCCCCAAGCGCTGGGCCGCTTCATGTTTTGGGTGGGGGTTCCCCTGGGCACCCTTG
GGTTTATGCAGACGGCGGACCTCTCTGGCCAGCTCTGGGCGGCCCCTTTGGTCTGCTGGCTGGCCACAGGGCTAGGGTAT
ACCCTGGCCAGTGCCTGGCTGCAGTGGCAGCACCACACCTGGCAGGGGAAGAAAGAGGGGGATCCCTGGCTTTGGAGCAG
AGCCCGGCGAGGCAGCTTTTACCTGACAGCCACCCTGGGAAATACGGGTTATTTGGGCTACCCCATCTGCTTGGCGGTGG
GCGGGAGCGCCTACTTTGGCTGGGCTTTGTTTTACGACCTGTTGGGCACCCTCTTGGCCGCCTACGGTCTGGGAGTCTGG
GTTGCCAGCCGCTACAGCGCTTCCTTCACCCCTCCCTGGCAGGCCACGCTCCGCGTCCTAAGCAGTCCCACTCTCTGGTC
TTTCTTTGTCGGCCTGGCAATGGCTCGCCACCCTCTCCCAGAATGGCTGGCCCAAGGGCTGACTGCCTTTGCCTGGAGCA
CGATTCCCTTGAGCTTAATCCTTTTGGGCATACGGCTAGCCCAGGTGCCGCACTGGGGATCCCTTCGCCCCGCCGCCGCG
GCCCTCTTCATCAAAATTGTTGTCCTGCCCCTTTTGGTGGGCCTGGGGTTAGCCTTGACCCCCTATCCCCCCTTGGCCAA
GCTGGTGCTGGTCTTGCAGACCGGCATGCCTCCTGCTATTGCCACCCTGGTGCTGGCGGAGGAATACGACTTGGATCGGG
AGCTAACAGCAGCAGCCTTGGCCCTAGGCTACGTGGCGGCCCTGCTGACCCTACCTTTCTGGTTGCTGCTGTGGGGAACC
TAG

Upstream 100 bases:

>100_bases
CCGACCGCGTCGTGGAGGAGGTGATCCTACGCATCTTTGCCCTGCGCGAACAGCCGCAGACCCCTCCGCAGGGATCCCTT
CCCCTCGGCTTCTAGAAGGC

Downstream 100 bases:

>100_bases
TAGGCCAGGTGAGAGAGGGTTTGCTCCAGGTAGCGATGTACCAGACGATCCAGGTCAGCCTCCTGGCTGGGCAGTTCCCG
TCCTTGGAGCCATCCGCGGA

Product: auxin efflux carrier (AEC) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLTTLFQVYLPLLGWTLLGFVLQRGLPPPWRHWLNPQALGRFMFWVGVPLGTLGFMQTADLSGQLWAAPLVCWLATGLGY
TLASAWLQWQHHTWQGKKEGDPWLWSRARRGSFYLTATLGNTGYLGYPICLAVGGSAYFGWALFYDLLGTLLAAYGLGVW
VASRYSASFTPPWQATLRVLSSPTLWSFFVGLAMARHPLPEWLAQGLTAFAWSTIPLSLILLGIRLAQVPHWGSLRPAAA
ALFIKIVVLPLLVGLGLALTPYPPLAKLVLVLQTGMPPAIATLVLAEEYDLDRELTAAALALGYVAALLTLPFWLLLWGT

Sequences:

>Translated_320_residues
MLTTLFQVYLPLLGWTLLGFVLQRGLPPPWRHWLNPQALGRFMFWVGVPLGTLGFMQTADLSGQLWAAPLVCWLATGLGY
TLASAWLQWQHHTWQGKKEGDPWLWSRARRGSFYLTATLGNTGYLGYPICLAVGGSAYFGWALFYDLLGTLLAAYGLGVW
VASRYSASFTPPWQATLRVLSSPTLWSFFVGLAMARHPLPEWLAQGLTAFAWSTIPLSLILLGIRLAQVPHWGSLRPAAA
ALFIKIVVLPLLVGLGLALTPYPPLAKLVLVLQTGMPPAIATLVLAEEYDLDRELTAAALALGYVAALLTLPFWLLLWGT
>Mature_320_residues
MLTTLFQVYLPLLGWTLLGFVLQRGLPPPWRHWLNPQALGRFMFWVGVPLGTLGFMQTADLSGQLWAAPLVCWLATGLGY
TLASAWLQWQHHTWQGKKEGDPWLWSRARRGSFYLTATLGNTGYLGYPICLAVGGSAYFGWALFYDLLGTLLAAYGLGVW
VASRYSASFTPPWQATLRVLSSPTLWSFFVGLAMARHPLPEWLAQGLTAFAWSTIPLSLILLGIRLAQVPHWGSLRPAAA
ALFIKIVVLPLLVGLGLALTPYPPLAKLVLVLQTGMPPAIATLVLAEEYDLDRELTAAALALGYVAALLTLPFWLLLWGT

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 35186; Mature: 35186

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTTLFQVYLPLLGWTLLGFVLQRGLPPPWRHWLNPQALGRFMFWVGVPLGTLGFMQTAD
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCC
LSGQLWAAPLVCWLATGLGYTLASAWLQWQHHTWQGKKEGDPWLWSRARRGSFYLTATLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEEECC
NTGYLGYPICLAVGGSAYFGWALFYDLLGTLLAAYGLGVWVASRYSASFTPPWQATLRVL
CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SSPTLWSFFVGLAMARHPLPEWLAQGLTAFAWSTIPLSLILLGIRLAQVPHWGSLRPAAA
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
ALFIKIVVLPLLVGLGLALTPYPPLAKLVLVLQTGMPPAIATLVLAEEYDLDRELTAAAL
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHH
ALGYVAALLTLPFWLLLWGT
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTTLFQVYLPLLGWTLLGFVLQRGLPPPWRHWLNPQALGRFMFWVGVPLGTLGFMQTAD
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCC
LSGQLWAAPLVCWLATGLGYTLASAWLQWQHHTWQGKKEGDPWLWSRARRGSFYLTATLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEEECC
NTGYLGYPICLAVGGSAYFGWALFYDLLGTLLAAYGLGVWVASRYSASFTPPWQATLRVL
CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SSPTLWSFFVGLAMARHPLPEWLAQGLTAFAWSTIPLSLILLGIRLAQVPHWGSLRPAAA
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
ALFIKIVVLPLLVGLGLALTPYPPLAKLVLVLQTGMPPAIATLVLAEEYDLDRELTAAAL
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHH
ALGYVAALLTLPFWLLLWGT
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]