| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is yoaM [H]
Identifier: 86605785
GI number: 86605785
Start: 1118160
End: 1118549
Strand: Reverse
Name: yoaM [H]
Synonym: CYA_1095
Alternate gene names: 86605785
Gene position: 1118549-1118160 (Counterclockwise)
Preceding gene: 86605786
Following gene: 86605784
Centisome position: 38.14
GC content: 63.59
Gene sequence:
>390_bases TTGCCCCCGAACGGCTGCAGCAGCATTTTCCAATCGAGAGGGGGGCAGTCGCTCCAGCCCCGCGACAACATCGCCCCTTC TCAGCCGGTGCTGGCGGTGGTGGCGGGATCCCTGCAGCGTCAGGCAGTCCATTTCCGCTGGGGCTTGATCCCTAGGTGGA GCCAAGCTCCCCAGGCTGGGTGGATCAATGCCCGCGCCGAGACGGTGGCCGAAAAACCCTCTTTCCGCCAGGCCTTTTGC CGCCGCCGCCTCCTGATCCCGGCAGATGGCTTCTATGAGTGGGTCGGCCGGGGCAAGCAGGGGAGGCAACCCTACTGGTT TTACCTAGTGGAGCGACTGTTGACACTCCCACCCAGGGGATTCTTACGCAGCCCACAAAAGAACCCGTAA
Upstream 100 bases:
>100_bases CCGAGTGGGTGGAGATCCCGCTGCGGGGGATCCTGCAGTTGCTGGGCATTTCCACCAAGGTCTGAGGGATCCCAGATGTG CGGACGGTTTAGCCTGGCAG
Downstream 100 bases:
>100_bases CGGCGTTGTCAAAGCGCCTCTAGACAGTTCCTTCACGCAAAGCCCCAAGGTTCTGCTGACTTTCTTAAGCAGATTGGCGG CAGCATTTGCCTCAGCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPPNGCSSIFQSRGGQSLQPRDNIAPSQPVLAVVAGSLQRQAVHFRWGLIPRWSQAPQAGWINARAETVAEKPSFRQAFC RRRLLIPADGFYEWVGRGKQGRQPYWFYLVERLLTLPPRGFLRSPQKNP
Sequences:
>Translated_129_residues MPPNGCSSIFQSRGGQSLQPRDNIAPSQPVLAVVAGSLQRQAVHFRWGLIPRWSQAPQAGWINARAETVAEKPSFRQAFC RRRLLIPADGFYEWVGRGKQGRQPYWFYLVERLLTLPPRGFLRSPQKNP >Mature_128_residues PPNGCSSIFQSRGGQSLQPRDNIAPSQPVLAVVAGSLQRQAVHFRWGLIPRWSQAPQAGWINARAETVAEKPSFRQAFCR RRLLIPADGFYEWVGRGKQGRQPYWFYLVERLLTLPPRGFLRSPQKNP
Specific function: Unknown
COG id: COG2135
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0361 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003738 [H]
Pfam domain/function: PF02586 DUF159 [H]
EC number: NA
Molecular weight: Translated: 14671; Mature: 14540
Theoretical pI: Translated: 11.94; Mature: 11.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPNGCSSIFQSRGGQSLQPRDNIAPSQPVLAVVAGSLQRQAVHFRWGLIPRWSQAPQAG CCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC WINARAETVAEKPSFRQAFCRRRLLIPADGFYEWVGRGKQGRQPYWFYLVERLLTLPPRG CCCHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCH FLRSPQKNP HHCCCCCCC >Mature Secondary Structure PPNGCSSIFQSRGGQSLQPRDNIAPSQPVLAVVAGSLQRQAVHFRWGLIPRWSQAPQAG CCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC WINARAETVAEKPSFRQAFCRRRLLIPADGFYEWVGRGKQGRQPYWFYLVERLLTLPPRG CCCHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCH FLRSPQKNP HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]