| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605708
Identifier: 86605708
GI number: 86605708
Start: 1025994
End: 1026683
Strand: Reverse
Name: 86605708
Synonym: CYA_1009
Alternate gene names: NA
Gene position: 1026683-1025994 (Counterclockwise)
Preceding gene: 86605709
Following gene: 86605707
Centisome position: 35.01
GC content: 49.71
Gene sequence:
>690_bases TTGTTGCTGAATGCCAACCCGGTATCCCTGACCTTTTCGCAGCCGGATCCACGAGAGCCGACACGATTTTATCCGTGCAA GTACGTTAAGCTGGATAATTTCCTGCCTGCTGAGATCAACCAAGCTATCCTTCAGCATGCCATCGCCCATCAAGATAAGT TTATCCCTTCCAGAAGCTACAGCCCAAGCAACACTGAAGCTGAGTCTCTCAAGTTTCGCCGCTCTTTGCGTCTAGATTAT GCGTACTTTCAAGAGTATGGATCCCTGTTGAGGGAAAAAATTGCAGCAGTGGCTCCCACAATCTTTGCTGAACTTGGAAT TGAAAACTTTGATATCCAGATCTTTGAGATGGAGATGATCGCCAGCTATGATGGCTGCTATTTCGCTCCCCACACTGATA ATTCTTATCCCCAAACTGCCTTTCGCCAGGTAAGTTGTGTGTACTACTTCCACAAGGAGCCCAAGCTCTACCGAGGAGGC GAGCTGCGCATCTATGACACGCAGAGGCAAAAGCCGCATCCACCAATCCTGTATGGAACCTACGACGAAGTGATCCCGAC CAACAACAGCATTGTCTTCTTCTCCAGCAGTTGTCTACACGAGATCCTGCCGGTGTTCGGCCCCAGCCAAGCCTTTGCCG ACAGCCGCTTTACCATCAACACTTGGTTAGGAACCAAGCGACTTGCCTAA
Upstream 100 bases:
>100_bases TCCCAATCTCAGCCAAGGGATCCATCTCTTGAGGTGGGATCCTCAAAACAGAGCCCTAACCGAGCAAGATTTGGCTTATA TTCGAGAACTAGGCCCAGGC
Downstream 100 bases:
>100_bases AGGCTCGAATTCAACATGGCCAGAGTCTGTATTGCTACTACGGTTCGGGATCCAGGCGTGTGCTTGGAGTCGTTCATTCG CTATCACCTTGCCCTTGGAA
Product: 2OG-Fe(II) oxygenase family oxidoreductase
Products: NA
Alternate protein names: ORF60-3 [H]
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MLLNANPVSLTFSQPDPREPTRFYPCKYVKLDNFLPAEINQAILQHAIAHQDKFIPSRSYSPSNTEAESLKFRRSLRLDY AYFQEYGSLLREKIAAVAPTIFAELGIENFDIQIFEMEMIASYDGCYFAPHTDNSYPQTAFRQVSCVYYFHKEPKLYRGG ELRIYDTQRQKPHPPILYGTYDEVIPTNNSIVFFSSSCLHEILPVFGPSQAFADSRFTINTWLGTKRLA
Sequences:
>Translated_229_residues MLLNANPVSLTFSQPDPREPTRFYPCKYVKLDNFLPAEINQAILQHAIAHQDKFIPSRSYSPSNTEAESLKFRRSLRLDY AYFQEYGSLLREKIAAVAPTIFAELGIENFDIQIFEMEMIASYDGCYFAPHTDNSYPQTAFRQVSCVYYFHKEPKLYRGG ELRIYDTQRQKPHPPILYGTYDEVIPTNNSIVFFSSSCLHEILPVFGPSQAFADSRFTINTWLGTKRLA >Mature_229_residues MLLNANPVSLTFSQPDPREPTRFYPCKYVKLDNFLPAEINQAILQHAIAHQDKFIPSRSYSPSNTEAESLKFRRSLRLDY AYFQEYGSLLREKIAAVAPTIFAELGIENFDIQIFEMEMIASYDGCYFAPHTDNSYPQTAFRQVSCVYYFHKEPKLYRGG ELRIYDTQRQKPHPPILYGTYDEVIPTNNSIVFFSSSCLHEILPVFGPSQAFADSRFTINTWLGTKRLA
Specific function: Unknown
COG id: COG3751
COG function: function code O; Predicted proline hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe2OG dioxygenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006620 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26423; Mature: 26423
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLNANPVSLTFSQPDPREPTRFYPCKYVKLDNFLPAEINQAILQHAIAHQDKFIPSRSY CEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC SPSNTEAESLKFRRSLRLDYAYFQEYGSLLREKIAAVAPTIFAELGIENFDIQIFEMEMI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE ASYDGCYFAPHTDNSYPQTAFRQVSCVYYFHKEPKLYRGGELRIYDTQRQKPHPPILYGT CCCCCEEECCCCCCCCCHHHHHHEEEEEEEECCCCEEECCEEEEEECCCCCCCCCEEECC YDEVIPTNNSIVFFSSSCLHEILPVFGPSQAFADSRFTINTWLGTKRLA HHHHCCCCCEEEEEEHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure MLLNANPVSLTFSQPDPREPTRFYPCKYVKLDNFLPAEINQAILQHAIAHQDKFIPSRSY CEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC SPSNTEAESLKFRRSLRLDYAYFQEYGSLLREKIAAVAPTIFAELGIENFDIQIFEMEMI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE ASYDGCYFAPHTDNSYPQTAFRQVSCVYYFHKEPKLYRGGELRIYDTQRQKPHPPILYGT CCCCCEEECCCCCCCCCHHHHHHEEEEEEEECCCCEEECCEEEEEECCCCCCCCCEEECC YDEVIPTNNSIVFFSSSCLHEILPVFGPSQAFADSRFTINTWLGTKRLA HHHHCCCCCEEEEEEHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 1670771 [H]