Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

Click here to switch to the map view.

The map label for this gene is 86605708

Identifier: 86605708

GI number: 86605708

Start: 1025994

End: 1026683

Strand: Reverse

Name: 86605708

Synonym: CYA_1009

Alternate gene names: NA

Gene position: 1026683-1025994 (Counterclockwise)

Preceding gene: 86605709

Following gene: 86605707

Centisome position: 35.01

GC content: 49.71

Gene sequence:

>690_bases
TTGTTGCTGAATGCCAACCCGGTATCCCTGACCTTTTCGCAGCCGGATCCACGAGAGCCGACACGATTTTATCCGTGCAA
GTACGTTAAGCTGGATAATTTCCTGCCTGCTGAGATCAACCAAGCTATCCTTCAGCATGCCATCGCCCATCAAGATAAGT
TTATCCCTTCCAGAAGCTACAGCCCAAGCAACACTGAAGCTGAGTCTCTCAAGTTTCGCCGCTCTTTGCGTCTAGATTAT
GCGTACTTTCAAGAGTATGGATCCCTGTTGAGGGAAAAAATTGCAGCAGTGGCTCCCACAATCTTTGCTGAACTTGGAAT
TGAAAACTTTGATATCCAGATCTTTGAGATGGAGATGATCGCCAGCTATGATGGCTGCTATTTCGCTCCCCACACTGATA
ATTCTTATCCCCAAACTGCCTTTCGCCAGGTAAGTTGTGTGTACTACTTCCACAAGGAGCCCAAGCTCTACCGAGGAGGC
GAGCTGCGCATCTATGACACGCAGAGGCAAAAGCCGCATCCACCAATCCTGTATGGAACCTACGACGAAGTGATCCCGAC
CAACAACAGCATTGTCTTCTTCTCCAGCAGTTGTCTACACGAGATCCTGCCGGTGTTCGGCCCCAGCCAAGCCTTTGCCG
ACAGCCGCTTTACCATCAACACTTGGTTAGGAACCAAGCGACTTGCCTAA

Upstream 100 bases:

>100_bases
TCCCAATCTCAGCCAAGGGATCCATCTCTTGAGGTGGGATCCTCAAAACAGAGCCCTAACCGAGCAAGATTTGGCTTATA
TTCGAGAACTAGGCCCAGGC

Downstream 100 bases:

>100_bases
AGGCTCGAATTCAACATGGCCAGAGTCTGTATTGCTACTACGGTTCGGGATCCAGGCGTGTGCTTGGAGTCGTTCATTCG
CTATCACCTTGCCCTTGGAA

Product: 2OG-Fe(II) oxygenase family oxidoreductase

Products: NA

Alternate protein names: ORF60-3 [H]

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MLLNANPVSLTFSQPDPREPTRFYPCKYVKLDNFLPAEINQAILQHAIAHQDKFIPSRSYSPSNTEAESLKFRRSLRLDY
AYFQEYGSLLREKIAAVAPTIFAELGIENFDIQIFEMEMIASYDGCYFAPHTDNSYPQTAFRQVSCVYYFHKEPKLYRGG
ELRIYDTQRQKPHPPILYGTYDEVIPTNNSIVFFSSSCLHEILPVFGPSQAFADSRFTINTWLGTKRLA

Sequences:

>Translated_229_residues
MLLNANPVSLTFSQPDPREPTRFYPCKYVKLDNFLPAEINQAILQHAIAHQDKFIPSRSYSPSNTEAESLKFRRSLRLDY
AYFQEYGSLLREKIAAVAPTIFAELGIENFDIQIFEMEMIASYDGCYFAPHTDNSYPQTAFRQVSCVYYFHKEPKLYRGG
ELRIYDTQRQKPHPPILYGTYDEVIPTNNSIVFFSSSCLHEILPVFGPSQAFADSRFTINTWLGTKRLA
>Mature_229_residues
MLLNANPVSLTFSQPDPREPTRFYPCKYVKLDNFLPAEINQAILQHAIAHQDKFIPSRSYSPSNTEAESLKFRRSLRLDY
AYFQEYGSLLREKIAAVAPTIFAELGIENFDIQIFEMEMIASYDGCYFAPHTDNSYPQTAFRQVSCVYYFHKEPKLYRGG
ELRIYDTQRQKPHPPILYGTYDEVIPTNNSIVFFSSSCLHEILPVFGPSQAFADSRFTINTWLGTKRLA

Specific function: Unknown

COG id: COG3751

COG function: function code O; Predicted proline hydroxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006620 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26423; Mature: 26423

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNANPVSLTFSQPDPREPTRFYPCKYVKLDNFLPAEINQAILQHAIAHQDKFIPSRSY
CEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC
SPSNTEAESLKFRRSLRLDYAYFQEYGSLLREKIAAVAPTIFAELGIENFDIQIFEMEMI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE
ASYDGCYFAPHTDNSYPQTAFRQVSCVYYFHKEPKLYRGGELRIYDTQRQKPHPPILYGT
CCCCCEEECCCCCCCCCHHHHHHEEEEEEEECCCCEEECCEEEEEECCCCCCCCCEEECC
YDEVIPTNNSIVFFSSSCLHEILPVFGPSQAFADSRFTINTWLGTKRLA
HHHHCCCCCEEEEEEHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MLLNANPVSLTFSQPDPREPTRFYPCKYVKLDNFLPAEINQAILQHAIAHQDKFIPSRSY
CEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC
SPSNTEAESLKFRRSLRLDYAYFQEYGSLLREKIAAVAPTIFAELGIENFDIQIFEMEMI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE
ASYDGCYFAPHTDNSYPQTAFRQVSCVYYFHKEPKLYRGGELRIYDTQRQKPHPPILYGT
CCCCCEEECCCCCCCCCHHHHHHEEEEEEEECCCCEEECCEEEEEECCCCCCCCCEEECC
YDEVIPTNNSIVFFSSSCLHEILPVFGPSQAFADSRFTINTWLGTKRLA
HHHHCCCCCEEEEEEHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 1670771 [H]