Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605673

Identifier: 86605673

GI number: 86605673

Start: 985155

End: 986375

Strand: Reverse

Name: 86605673

Synonym: CYA_0973

Alternate gene names: NA

Gene position: 986375-985155 (Counterclockwise)

Preceding gene: 86605674

Following gene: 86605672

Centisome position: 33.63

GC content: 60.93

Gene sequence:

>1221_bases
ATGGCCCTTTGGATCTACGTCGTGCCCCCCCTGGCCGGGCTGGTGATCGGCTATTTCACCAACGACATCGCCATCAAGAT
GCTCTTCCGGCCCTACCGGGCCTATCGGATTTTCGGCTGGCGCATCCCCTTCACGCCCGGCCTGATCCCGCAGAACCAGC
CCCGCCTGGCCAAGCAGATTGCCAAGACCATCATGGGATCCCTGCTCACGCCAGAGGAGCTGCACAATCTGGCCCGCAAG
CTGCTGCGAACTGAGCGCATGCAGGCAGGGATCCGCTGGCTGCTGGGGGTGGCGCTGGATCGGCTGCAAAACCCCGAGCA
ACAGCAGCAAACCGCTCAGGTGCTGGCGCGCATCTTGGCCGATCTGTTCAACGAGTCGTTGCCCCGCCTGGTGAAGGTGC
TCGCCCGCCAGGAGACTTTTTTGGAGGGGCCGATTAACCAACTGTTCGACCAGGTGCTGCTAGAGCTGCGCCTCAACGCC
GAGCAAGCCCGGCAGCTTTCGGAGTGGATCCTGAAGCAGGCGCTGCCCCCCAAGGTGTTGCGGCAGAACCTGGTGGATTT
TCTCACCGATCGCAACATCGAAGCTTTGGATGAAGAATTTCGCGAGCGGGCCACCGGCTCCTACTGGCTGGTGGCCAACT
TGTTTGGCCTCAAAAACGCCCTGCTGCGCCTGCGCACCTATTGCCTGGAGGAGCCGGAAGGGGCAGAGGCCATCTTGGAA
GATCTGCTCAAAGACATCAACGCCCCCCGCCGCCTGACCGAGATCCTGCAGAACCTCTCCCTGCAAAACCTGCCGGTTTC
CGCCGTACGTCAGTTGCGCCGTGCCCTGCGCGATGGGATCCAAGATTACCTGCGCAGCCAAGGGCCAGAGGTTATCAAGG
GGCTGGGGGAGAGCATCGATTGGGAAAAAGTGGCCAGCCTGGTGTTGGGTCGCCTGCGCAACTCCAAGGCGCTGATCGCC
TCCATCGATCAGATCAGCGCCGACCTGGCTTTGATCCTGGAGCGCTACCTAGAGCGGGATCTGGAATCGCTGATGATGCA
GGTGATCCCCGTGTTGAACTTAGATCAGGTGATTGCCGACAAAGTCAACGCCACCTCCCCTGCTGAGCTGGAGCAGGCCA
TTCAGCAAATTGTGCGCCAGGAACTGCAGGCCATCGTCAACTTGGGGGGGCTGTTGGGTTTTTTGGTGGGCTGCGTGCAG
GTGCTGTTTTTGCTGAGGTGA

Upstream 100 bases:

>100_bases
GGAACTGGAACTGAGCGAGAGCCTGATCATCCAATAGCCTTGACAAGAAGCGAGCAGGAGCGGGTCGGTAGAGTAGAGAA
GATCCCCCCAAGTTTGCTCC

Downstream 100 bases:

>100_bases
CGGCCCCCTTCCCCAGAAAACGGGAGCTTGGATTGCGGCTTTTGCTTCAGTTACGATATTGGAATGCGGTTAACAATTCT
CCACACTTCCGATCTCCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MALWIYVVPPLAGLVIGYFTNDIAIKMLFRPYRAYRIFGWRIPFTPGLIPQNQPRLAKQIAKTIMGSLLTPEELHNLARK
LLRTERMQAGIRWLLGVALDRLQNPEQQQQTAQVLARILADLFNESLPRLVKVLARQETFLEGPINQLFDQVLLELRLNA
EQARQLSEWILKQALPPKVLRQNLVDFLTDRNIEALDEEFRERATGSYWLVANLFGLKNALLRLRTYCLEEPEGAEAILE
DLLKDINAPRRLTEILQNLSLQNLPVSAVRQLRRALRDGIQDYLRSQGPEVIKGLGESIDWEKVASLVLGRLRNSKALIA
SIDQISADLALILERYLERDLESLMMQVIPVLNLDQVIADKVNATSPAELEQAIQQIVRQELQAIVNLGGLLGFLVGCVQ
VLFLLR

Sequences:

>Translated_406_residues
MALWIYVVPPLAGLVIGYFTNDIAIKMLFRPYRAYRIFGWRIPFTPGLIPQNQPRLAKQIAKTIMGSLLTPEELHNLARK
LLRTERMQAGIRWLLGVALDRLQNPEQQQQTAQVLARILADLFNESLPRLVKVLARQETFLEGPINQLFDQVLLELRLNA
EQARQLSEWILKQALPPKVLRQNLVDFLTDRNIEALDEEFRERATGSYWLVANLFGLKNALLRLRTYCLEEPEGAEAILE
DLLKDINAPRRLTEILQNLSLQNLPVSAVRQLRRALRDGIQDYLRSQGPEVIKGLGESIDWEKVASLVLGRLRNSKALIA
SIDQISADLALILERYLERDLESLMMQVIPVLNLDQVIADKVNATSPAELEQAIQQIVRQELQAIVNLGGLLGFLVGCVQ
VLFLLR
>Mature_405_residues
ALWIYVVPPLAGLVIGYFTNDIAIKMLFRPYRAYRIFGWRIPFTPGLIPQNQPRLAKQIAKTIMGSLLTPEELHNLARKL
LRTERMQAGIRWLLGVALDRLQNPEQQQQTAQVLARILADLFNESLPRLVKVLARQETFLEGPINQLFDQVLLELRLNAE
QARQLSEWILKQALPPKVLRQNLVDFLTDRNIEALDEEFRERATGSYWLVANLFGLKNALLRLRTYCLEEPEGAEAILED
LLKDINAPRRLTEILQNLSLQNLPVSAVRQLRRALRDGIQDYLRSQGPEVIKGLGESIDWEKVASLVLGRLRNSKALIAS
IDQISADLALILERYLERDLESLMMQVIPVLNLDQVIADKVNATSPAELEQAIQQIVRQELQAIVNLGGLLGFLVGCVQV
LFLLR

Specific function: Unknown

COG id: COG4399

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0754 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007383
- InterPro:   IPR016991 [H]

Pfam domain/function: PF04286 DUF445 [H]

EC number: NA

Molecular weight: Translated: 46195; Mature: 46064

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALWIYVVPPLAGLVIGYFTNDIAIKMLFRPYRAYRIFGWRIPFTPGLIPQNQPRLAKQI
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHH
AKTIMGSLLTPEELHNLARKLLRTERMQAGIRWLLGVALDRLQNPEQQQQTAQVLARILA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
DLFNESLPRLVKVLARQETFLEGPINQLFDQVLLELRLNAEQARQLSEWILKQALPPKVL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH
RQNLVDFLTDRNIEALDEEFRERATGSYWLVANLFGLKNALLRLRTYCLEEPEGAEAILE
HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DLLKDINAPRRLTEILQNLSLQNLPVSAVRQLRRALRDGIQDYLRSQGPEVIKGLGESID
HHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
WEKVASLVLGRLRNSKALIASIDQISADLALILERYLERDLESLMMQVIPVLNLDQVIAD
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KVNATSPAELEQAIQQIVRQELQAIVNLGGLLGFLVGCVQVLFLLR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ALWIYVVPPLAGLVIGYFTNDIAIKMLFRPYRAYRIFGWRIPFTPGLIPQNQPRLAKQI
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHH
AKTIMGSLLTPEELHNLARKLLRTERMQAGIRWLLGVALDRLQNPEQQQQTAQVLARILA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
DLFNESLPRLVKVLARQETFLEGPINQLFDQVLLELRLNAEQARQLSEWILKQALPPKVL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH
RQNLVDFLTDRNIEALDEEFRERATGSYWLVANLFGLKNALLRLRTYCLEEPEGAEAILE
HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DLLKDINAPRRLTEILQNLSLQNLPVSAVRQLRRALRDGIQDYLRSQGPEVIKGLGESID
HHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
WEKVASLVLGRLRNSKALIASIDQISADLALILERYLERDLESLMMQVIPVLNLDQVIAD
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KVNATSPAELEQAIQQIVRQELQAIVNLGGLLGFLVGCVQVLFLLR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA