| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605664
Identifier: 86605664
GI number: 86605664
Start: 975020
End: 975553
Strand: Reverse
Name: 86605664
Synonym: CYA_0962
Alternate gene names: NA
Gene position: 975553-975020 (Counterclockwise)
Preceding gene: 86605666
Following gene: 86605660
Centisome position: 33.26
GC content: 56.18
Gene sequence:
>534_bases TTGCTCAGCGATATTGCTCTCAAGGGTTGGGCGGTTTCCCTAGCGGCGGAATCCCAGCTTCTGCTTAAACATGGGTACCT TCAAGATGCTGTTGATGTCCTGGACTTCGAGGTTCCTCGCTTCCGGGAGCTAAGCGAAAGGTGGTGTGCAGCTCTCTTGC CAGCGGATCGGCCTCAGCTCCGGACGGCCTACACGTACAAAGCTCCCGGCTTTGCTGGCCGCATCTCTAGCGAGCGCATC CAGCGCATTGCTCGTCTTTCTCCCTTCGACCGAGCCCTTACGCCGGAGCAGCGCTTCCTCAGAGAAAAGAACCTCTCCGT CGAGTTCCAGATGACCTATTTCCAAGAGCTGGACAAATCTTGGTATCTTGCCCAAGCTGCCCTGGCCGAATACTTGGATA TCCTCAGCGAGCTCACGGAGCGCCTCGAAGGTCTCCAGTCTTTTGCTCACCTCTGTCGAGAGCTTAACCAGGCGGATCCC TACCGATTGATCCCCTCTGAACCCCCAAGTCTTTATCTACTGGCTACCGAGTGA
Upstream 100 bases:
>100_bases TTAACCTCGAGAACAGCATCGAGGAAGGACAGGAAATATCCGAATTTTTTTCTCTGACCAAGCCCATCAGATCCCTGTTG AGCGCCAGGTCCACTGCCTA
Downstream 100 bases:
>100_bases GAAGCTTACAGGCCTTAGCCCACCTCGCGGGCGGCCCGGACCAACAGCCCCGCCATGATCAGCCCCGCCAGGATCGAGCT GCCGCCGTAGCTAAACAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MLSDIALKGWAVSLAAESQLLLKHGYLQDAVDVLDFEVPRFRELSERWCAALLPADRPQLRTAYTYKAPGFAGRISSERI QRIARLSPFDRALTPEQRFLREKNLSVEFQMTYFQELDKSWYLAQAALAEYLDILSELTERLEGLQSFAHLCRELNQADP YRLIPSEPPSLYLLATE
Sequences:
>Translated_177_residues MLSDIALKGWAVSLAAESQLLLKHGYLQDAVDVLDFEVPRFRELSERWCAALLPADRPQLRTAYTYKAPGFAGRISSERI QRIARLSPFDRALTPEQRFLREKNLSVEFQMTYFQELDKSWYLAQAALAEYLDILSELTERLEGLQSFAHLCRELNQADP YRLIPSEPPSLYLLATE >Mature_177_residues MLSDIALKGWAVSLAAESQLLLKHGYLQDAVDVLDFEVPRFRELSERWCAALLPADRPQLRTAYTYKAPGFAGRISSERI QRIARLSPFDRALTPEQRFLREKNLSVEFQMTYFQELDKSWYLAQAALAEYLDILSELTERLEGLQSFAHLCRELNQADP YRLIPSEPPSLYLLATE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20384; Mature: 20384
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDIALKGWAVSLAAESQLLLKHGYLQDAVDVLDFEVPRFRELSERWCAALLPADRPQL CCCCHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC RTAYTYKAPGFAGRISSERIQRIARLSPFDRALTPEQRFLREKNLSVEFQMTYFQELDKS CEEEEECCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHCCCCEEEEHHHHHHHHHH WYLAQAALAEYLDILSELTERLEGLQSFAHLCRELNQADPYRLIPSEPPSLYLLATE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEECC >Mature Secondary Structure MLSDIALKGWAVSLAAESQLLLKHGYLQDAVDVLDFEVPRFRELSERWCAALLPADRPQL CCCCHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC RTAYTYKAPGFAGRISSERIQRIARLSPFDRALTPEQRFLREKNLSVEFQMTYFQELDKS CEEEEECCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHCCCCEEEEHHHHHHHHHH WYLAQAALAEYLDILSELTERLEGLQSFAHLCRELNQADPYRLIPSEPPSLYLLATE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA