| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is yaeL [C]
Identifier: 86605615
GI number: 86605615
Start: 922065
End: 923165
Strand: Reverse
Name: yaeL [C]
Synonym: CYA_0913
Alternate gene names: 86605615
Gene position: 923165-922065 (Counterclockwise)
Preceding gene: 86605616
Following gene: 86605614
Centisome position: 31.48
GC content: 63.12
Gene sequence:
>1101_bases ATGCCTGTTCTCCTCTCCATCGCCATTCTCGCCCTGCTGATCCTGGTGCATGAGGCGGGACACTTCGCCGCAGCCAAACT CCAAGGGATCCACGTCAACCGCTTTTCGCTGGGATTTGGCCCGGTGCTGTGGCGCTACCAGGGCAAGGAGACGGAGTACG CCATTCGCGCCCTGCCGTTGGGGGGCTACGTGGGCTTTCCCGACGATGACGAGCGCTCTCCCTACCCGCCCGACGACCCG GATCTGCTGAAGAATCGCCCTGTCGCGGATCGCCTGGTGGTGATGAGCGCGGGGGTGATGGCCAACCTGGCCTTCGCCTA TCTGGTGCTGGTGCTGATGTTTGCCACGCTGGGGATCCCATCGGTGACGCGCATCCATCCCGGCATTCTCATCGCCCAGG TGATGCCGGATAGCCCGGCGGAGCGGGCCGGCTTGCAGGCGGAAGATGTGGTGTTGCGGGCAGCTGACCACGATTACAGC ACGGTTGCCGACGAGGCCTCGGCCTTGGCAGCTCTCAATGATTTTCAGGCGTTGATCCGCCGCAGCCAAAACCGGCCCGT CCCCCTGCAGGTGCAGCGAGGGGAGGGGGATCCCATTCTGGAGATCACGGTGACTCCCGAGATGCGGGGAGAGGTGGTGG CCATTGGGGTCAACCTGGCCCCCAACCAAGAGGTGACACTGCGCCCGGCTCAGAGCCCGGCAGAGATCTTTGCCGAAGCC GGGAACGCCTACCAGCGCTTGGTGATGATGAACCTCAGTGGCCTGCAGCAGCTCCTGCAGAACTTCCAAAACACCGCCAC CCAGGTATCCGGCCCGGTGGGGATTGTCAAGCTCGGCGCGGATCTGGCGCGGGACGATGCTGCCAGCTTGTTTAATTTCA CCGCCTTGATCAGCATCAACCTGGCTATTCTCAACCTGTTGCCCCTGCCCGCCTTGGATGGGGGACACATCGCCTTTTTG ATCTTGGAAGCGATCCGCGGCAAGCGGCTGCCCAAAGAACTGGAGGAACGGGTGATGCAGACGGGCTTGGTGCTGCTGCT GGGGCTGGGGGTAGTGCTGATCTTCAAGGACACCCTTGCCATCGTCACCGGGTCGGGCTAG
Upstream 100 bases:
>100_bases TTCTGGTCTGTTATCTTGGTTCCTTAAGGCGGCAGGTGCAGCCGTCGCTGTGGCTCTCTGCCTCTTGCTCTTTTTTTCCT TCTCTCCTTCAAGCCAGCCC
Downstream 100 bases:
>100_bases TTGCAGATGAGCGGCAAGCGGGCTTTGCGCCAGCGGGCTTTGGAGATCCTGATCCGGCTGAAGCGCCATTACCCCAACTC TACCTGTGCCCTCCACTACG
Product: membrane-associated zinc metalloprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MPVLLSIAILALLILVHEAGHFAAAKLQGIHVNRFSLGFGPVLWRYQGKETEYAIRALPLGGYVGFPDDDERSPYPPDDP DLLKNRPVADRLVVMSAGVMANLAFAYLVLVLMFATLGIPSVTRIHPGILIAQVMPDSPAERAGLQAEDVVLRAADHDYS TVADEASALAALNDFQALIRRSQNRPVPLQVQRGEGDPILEITVTPEMRGEVVAIGVNLAPNQEVTLRPAQSPAEIFAEA GNAYQRLVMMNLSGLQQLLQNFQNTATQVSGPVGIVKLGADLARDDAASLFNFTALISINLAILNLLPLPALDGGHIAFL ILEAIRGKRLPKELEERVMQTGLVLLLGLGVVLIFKDTLAIVTGSG
Sequences:
>Translated_366_residues MPVLLSIAILALLILVHEAGHFAAAKLQGIHVNRFSLGFGPVLWRYQGKETEYAIRALPLGGYVGFPDDDERSPYPPDDP DLLKNRPVADRLVVMSAGVMANLAFAYLVLVLMFATLGIPSVTRIHPGILIAQVMPDSPAERAGLQAEDVVLRAADHDYS TVADEASALAALNDFQALIRRSQNRPVPLQVQRGEGDPILEITVTPEMRGEVVAIGVNLAPNQEVTLRPAQSPAEIFAEA GNAYQRLVMMNLSGLQQLLQNFQNTATQVSGPVGIVKLGADLARDDAASLFNFTALISINLAILNLLPLPALDGGHIAFL ILEAIRGKRLPKELEERVMQTGLVLLLGLGVVLIFKDTLAIVTGSG >Mature_365_residues PVLLSIAILALLILVHEAGHFAAAKLQGIHVNRFSLGFGPVLWRYQGKETEYAIRALPLGGYVGFPDDDERSPYPPDDPD LLKNRPVADRLVVMSAGVMANLAFAYLVLVLMFATLGIPSVTRIHPGILIAQVMPDSPAERAGLQAEDVVLRAADHDYST VADEASALAALNDFQALIRRSQNRPVPLQVQRGEGDPILEITVTPEMRGEVVAIGVNLAPNQEVTLRPAQSPAEIFAEAG NAYQRLVMMNLSGLQQLLQNFQNTATQVSGPVGIVKLGADLARDDAASLFNFTALISINLAILNLLPLPALDGGHIAFLI LEAIRGKRLPKELEERVMQTGLVLLLGLGVVLIFKDTLAIVTGSG
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=251, Percent_Identity=30.6772908366534, Blast_Score=89, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR004387 - InterPro: IPR008915 [H]
Pfam domain/function: PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 39303; Mature: 39172
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLLSIAILALLILVHEAGHFAAAKLQGIHVNRFSLGFGPVLWRYQGKETEYAIRALPL CCHHHHHHHHHHHHHHHCCCCEEEHEEECEEEEEEECCCCCEEEEECCCCCCEEEEEEEC GGYVGFPDDDERSPYPPDDPDLLKNRPVADRLVVMSAGVMANLAFAYLVLVLMFATLGIP CCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SVTRIHPGILIAQVMPDSPAERAGLQAEDVVLRAADHDYSTVADEASALAALNDFQALIR CHHHCCCCEEEEEECCCCCHHHCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH RSQNRPVPLQVQRGEGDPILEITVTPEMRGEVVAIGVNLAPNQEVTLRPAQSPAEIFAEA HCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHC GNAYQRLVMMNLSGLQQLLQNFQNTATQVSGPVGIVKLGADLARDDAASLFNFTALISIN CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH LAILNLLPLPALDGGHIAFLILEAIRGKRLPKELEERVMQTGLVLLLGLGVVLIFKDTLA HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEE IVTGSG EEECCC >Mature Secondary Structure PVLLSIAILALLILVHEAGHFAAAKLQGIHVNRFSLGFGPVLWRYQGKETEYAIRALPL CHHHHHHHHHHHHHHHCCCCEEEHEEECEEEEEEECCCCCEEEEECCCCCCEEEEEEEC GGYVGFPDDDERSPYPPDDPDLLKNRPVADRLVVMSAGVMANLAFAYLVLVLMFATLGIP CCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SVTRIHPGILIAQVMPDSPAERAGLQAEDVVLRAADHDYSTVADEASALAALNDFQALIR CHHHCCCCEEEEEECCCCCHHHCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH RSQNRPVPLQVQRGEGDPILEITVTPEMRGEVVAIGVNLAPNQEVTLRPAQSPAEIFAEA HCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHC GNAYQRLVMMNLSGLQQLLQNFQNTATQVSGPVGIVKLGADLARDDAASLFNFTALISIN CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH LAILNLLPLPALDGGHIAFLILEAIRGKRLPKELEERVMQTGLVLLLGLGVVLIFKDTLA HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEE IVTGSG EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]