| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605591
Identifier: 86605591
GI number: 86605591
Start: 894897
End: 895712
Strand: Reverse
Name: 86605591
Synonym: CYA_0889
Alternate gene names: NA
Gene position: 895712-894897 (Counterclockwise)
Preceding gene: 86605593
Following gene: 86605589
Centisome position: 30.54
GC content: 62.5
Gene sequence:
>816_bases GTGTTGCTGGACGATATCTGGGGGGGGCATCAACACTCGCAGCGGCGGCTCTTTGTCTGGTTTGAGTACATCCTCTCCGA CGAACAGCAGGAGCGGGTGGACGAATACCAAAACCAGCTAGAGGCTTTCTGGACAAAACCGGCAGCAGGGCTGATCCGCT TTGATTACGAAACTCGCCAGCACGGGATCCAAAAGGTCCTCACCTACCCGGTTTGCCTGTTTTATGCCCGCCGCGCCAAG TACTTGGCCGCCTTCGGCCAGCTCCCGCACGCTGCCAGATCCCTGGGCTGGCACAACTTTCGCCTGGATCGCATTCGCTC GCCTCGCCTGACGGTGGTGCCCTGGTCTGACCCTGCGGTGCCGGCGGAGCTCTTGGCCCGCCAGAGGCAGGGGAATCTGC CCACTCCTGAGGAGGTGCAAGCGGCCTGGGAAGAGGCCTGGGGATCCGATTTCTATCTGCCCAAGGCGCTCTTGATCCTG CGCTTTGCGCCGCAGTTTGCCCGCCGCTACGTGGACAACACAGTACGCCACCCCACCTTCCAGCCCATTGCCTACGAGCG GATCCCGGCTTTGGTGCGGCGGGAGATCGCCGATGCGGGGGAACGGGAAAAGATCTTGCACATTCTCCGGCAGAGGCCGG CCAGCGACCGCTACTTCTGCGCCTATGTGCGGGTGGGAGACACCAATTTCACCATGCGCCTGCGGGATTGGCGGCCCAAC GGCGAGGTCATCGCTCCCCTGGCCTACCGGGAACAGATGGCTCGGGAAGCCCAGGCAGAGCTGCAGTTTTATCGCCCCGA CCTGAAGCTTTCTTGA
Upstream 100 bases:
>100_bases CTTGCCGACGCCCGCCTCGGCCTTGACGTTGTCGGGTAGCCAGCTTGAGCAGATCTACCACGTCCTCAGCGACGTGGCCT TTGTGCATCCCGATGTGCAG
Downstream 100 bases:
>100_bases CCTTCCTGCCCATGACCACCCTCTACCTAACCGAGCCGGGGACTGTGGTTCACTGCCAGAACCAAAGCTTGCTCATTCGC CGCCGTGGTCAAGAGCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MLLDDIWGGHQHSQRRLFVWFEYILSDEQQERVDEYQNQLEAFWTKPAAGLIRFDYETRQHGIQKVLTYPVCLFYARRAK YLAAFGQLPHAARSLGWHNFRLDRIRSPRLTVVPWSDPAVPAELLARQRQGNLPTPEEVQAAWEEAWGSDFYLPKALLIL RFAPQFARRYVDNTVRHPTFQPIAYERIPALVRREIADAGEREKILHILRQRPASDRYFCAYVRVGDTNFTMRLRDWRPN GEVIAPLAYREQMAREAQAELQFYRPDLKLS
Sequences:
>Translated_271_residues MLLDDIWGGHQHSQRRLFVWFEYILSDEQQERVDEYQNQLEAFWTKPAAGLIRFDYETRQHGIQKVLTYPVCLFYARRAK YLAAFGQLPHAARSLGWHNFRLDRIRSPRLTVVPWSDPAVPAELLARQRQGNLPTPEEVQAAWEEAWGSDFYLPKALLIL RFAPQFARRYVDNTVRHPTFQPIAYERIPALVRREIADAGEREKILHILRQRPASDRYFCAYVRVGDTNFTMRLRDWRPN GEVIAPLAYREQMAREAQAELQFYRPDLKLS >Mature_271_residues MLLDDIWGGHQHSQRRLFVWFEYILSDEQQERVDEYQNQLEAFWTKPAAGLIRFDYETRQHGIQKVLTYPVCLFYARRAK YLAAFGQLPHAARSLGWHNFRLDRIRSPRLTVVPWSDPAVPAELLARQRQGNLPTPEEVQAAWEEAWGSDFYLPKALLIL RFAPQFARRYVDNTVRHPTFQPIAYERIPALVRREIADAGEREKILHILRQRPASDRYFCAYVRVGDTNFTMRLRDWRPN GEVIAPLAYREQMAREAQAELQFYRPDLKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32030; Mature: 32030
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLDDIWGGHQHSQRRLFVWFEYILSDEQQERVDEYQNQLEAFWTKPAAGLIRFDYETRQ CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHH HGIQKVLTYPVCLFYARRAKYLAAFGQLPHAARSLGWHNFRLDRIRSPRLTVVPWSDPAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHCCCCCEEEEECCCCCC PAELLARQRQGNLPTPEEVQAAWEEAWGSDFYLPKALLILRFAPQFARRYVDNTVRHPTF CHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QPIAYERIPALVRREIADAGEREKILHILRQRPASDRYFCAYVRVGDTNFTMRLRDWRPN CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCC GEVIAPLAYREQMAREAQAELQFYRPDLKLS CCEECHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLLDDIWGGHQHSQRRLFVWFEYILSDEQQERVDEYQNQLEAFWTKPAAGLIRFDYETRQ CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHH HGIQKVLTYPVCLFYARRAKYLAAFGQLPHAARSLGWHNFRLDRIRSPRLTVVPWSDPAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHCCCCCEEEEECCCCCC PAELLARQRQGNLPTPEEVQAAWEEAWGSDFYLPKALLILRFAPQFARRYVDNTVRHPTF CHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QPIAYERIPALVRREIADAGEREKILHILRQRPASDRYFCAYVRVGDTNFTMRLRDWRPN CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCC GEVIAPLAYREQMAREAQAELQFYRPDLKLS CCEECHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA