| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is 86605514
Identifier: 86605514
GI number: 86605514
Start: 819298
End: 819891
Strand: Reverse
Name: 86605514
Synonym: CYA_0808
Alternate gene names: NA
Gene position: 819891-819298 (Counterclockwise)
Preceding gene: 86605515
Following gene: 86605513
Centisome position: 27.96
GC content: 52.36
Gene sequence:
>594_bases ATGGCTAGGTATGTAAAACCGAGAGAAGCGGCGGATTATTTTGGGGTGTGTCTCCACACCTTGAGGCGATGGGAACAGAA GGGCTGGATCCATGCAGTACGTACACCATCCGGTAGGGCGAGAAGGTATGACCTCGACAGCTACATCAGAACGCCAAAGA AAGCCAAACGAGTCGTTTTGTACGCCCGAGTCAGCAGTCGAGGGCAGAAACCAGACTTGGAGAGACAGATTGCAAGACTG GTTAACCTATATCCTGGAGCCGAGGTGGTCGGAGAGATTGGCGGCGGTCTCGACTTCAAAAGACCAAAGTTCCTTGCCTT ATTGGAACGAGTCCGTGCAGGAGATGTCGGAACAATTGTGGTCGCTCACCGGGATCGACTCTGCCGGTTTGGATTTGAGT TCGTTGAGTGGTACTGCTGTCAATACGGGTGCGAAATCTTGGTTCTCGATGACGATCACCTTTCTCCCCAACAGGAACTG GTTGAGGATATCCTCACCATCCTGCACTGCTTCAGCAGTCGGCTCTACGGACTCAGAAAATACCGGGCTGCAATCGAGAA AGATACGGATTTATCCGGAGCCAGCGCTGGCTAA
Upstream 100 bases:
>100_bases AGGATGATAGGTTTCCTGCTGAGGTGAGCATGACTCTAGTCAATGATATACTGGACTATACTGAAAATAATGTACAGTAT GTTCAGTATAGCTGCTTGGT
Downstream 100 bases:
>100_bases AGTTTGGAAGCGGTGGCAAGCGGCGTGCCGGTACTGCTACAACCAAGCGATTGCCTATCAGCGTCAGCATGGTGCCCCAA AAACGGCCAGAAAGCTGCGG
Product: ISSoc2, resolvase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYDLDSYIRTPKKAKRVVLYARVSSRGQKPDLERQIARL VNLYPGAEVVGEIGGGLDFKRPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCCQYGCEILVLDDDHLSPQQEL VEDILTILHCFSSRLYGLRKYRAAIEKDTDLSGASAG
Sequences:
>Translated_197_residues MARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYDLDSYIRTPKKAKRVVLYARVSSRGQKPDLERQIARL VNLYPGAEVVGEIGGGLDFKRPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCCQYGCEILVLDDDHLSPQQEL VEDILTILHCFSSRLYGLRKYRAAIEKDTDLSGASAG >Mature_196_residues ARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYDLDSYIRTPKKAKRVVLYARVSSRGQKPDLERQIARLV NLYPGAEVVGEIGGGLDFKRPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCCQYGCEILVLDDDHLSPQQELV EDILTILHCFSSRLYGLRKYRAAIEKDTDLSGASAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR000551 - InterPro: IPR006119 - InterPro: IPR010093 [H]
Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]
EC number: NA
Molecular weight: Translated: 22578; Mature: 22447
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS00397 RECOMBINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYDLDSYIRTPKKAKRVVL CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECHHHHHHCCHHHHHEEE YARVSSRGQKPDLERQIARLVNLYPGAEVVGEIGGGLDFKRPKFLALLERVRAGDVGTIV EEEHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEE VAHRDRLCRFGFEFVEWYCCQYGCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRK EECHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YRAAIEKDTDLSGASAG HHHHHHCCCCCCCCCCC >Mature Secondary Structure ARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYDLDSYIRTPKKAKRVVL CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECHHHHHHCCHHHHHEEE YARVSSRGQKPDLERQIARLVNLYPGAEVVGEIGGGLDFKRPKFLALLERVRAGDVGTIV EEEHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEE VAHRDRLCRFGFEFVEWYCCQYGCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRK EECHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YRAAIEKDTDLSGASAG HHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]