Click here to switch to the map view.

The map label for this gene is 86605301

Identifier: 86605301

GI number: 86605301

Start: 596648

End: 597418

Strand: Reverse

Name: 86605301

Synonym: CYA_0585

Alternate gene names: NA

Gene position: 597418-596648 (Counterclockwise)

Preceding gene: 86605302

Following gene: 86605300

Centisome position: 20.37

GC content: 58.24

Gene sequence:

>771_bases
ATGACCTACTGCCTTGGCATCATCACCCGCTTTGGCTTGGTGATGGCGGCAGATTCCCGCACCCACGCCGGGGTGGACTA
CGTCTCCACCTACCAAAAGCTGTTCGATTTTTCCGTGCCCGAAGAGCGGGTGATCTTGATCTGCACCTCCGGCAACCTGT
CCATCACCCAGGGCGTTTTGACCGAAGTGCAGCGGGATCTGCGCCAACCGGAAAGTTCCAATCTCCACACCTTCCCCCAT
CTCTACGACGTGGCCCGCTACCTGGGATCCAAAATTCGGTACATCCAGGAGCAAGACCGACCCTGGCTGGAAAAGGACGG
TATCGACGCCCAGTGCAGCCTGTTGCTGGGGGGACAGATCCGAGGCGAAGAGCCGGCCCTCTTTTTGATCTACAGCCAGG
GCAACTGCATCCAGGCCACCCCGGAAACCCCTTTTTTGCAGATGGGGGAAACCAAATACGGCAAACCCATCCTGGATCGC
ATCCTCTCCTACGAAACCTCGCTAGCAGATGCGGCCAAATGCGCTCTCCTCTCCATTGACTCCACCATGAAATCCAACAT
CTCCGTCGGCCCCCCCATCGATTTGGTGATGGTGCAAGCGGATCAGTTCAAGGTCACCCACCGTCTGCGCCTGCGCACCA
GGGATCCCTACCTGGCCAAGATGCGCAAACTGTGGGAGAGCGCCCTCAAACAAGCCTTCGACCAAATGCCGCCCATCGAG
TGGAACCACTCAGACCCAGCGGATGCCGATCAAGAAGAGCTGATCGACTGA

Upstream 100 bases:

>100_bases
GGGAGGAAATCCGCCACAAAATCGGATTTGCTTTCCCCTGAACCTCTACAATCGCCTCTACAATCCCTCTACAATCAGAG
AGCCGAGCCGCATCGTTCGC

Downstream 100 bases:

>100_bases
GGGGGGGAGATTGGTAGGATAAGGTATCCCTGCTCAGCCCTTGGTATGTCAGCCCACACCTTTCAGGACTTGATCTTTCG
CCTGCAGCAGTTTTGGGGGG

Product: T1 family peptidase

Products: NA

Alternate protein names: Proteasome-Type Protease; 20S Proteasome A/B Subunit; Peptidase T1 Family; Peptidase T1A Family; T1 Family Peptidase; 20S Proteasome Subunits A/B; 20S Proteasome A And Subunit Bs; Proteasome Protease; A And B-Type Proteasome Family Protein; T1A Family Peptidase; Proteasome A-Type And B-Type Family Protein; Proteasome Alpha-1 Subunit; Proteasome-Type Protease-Like Protein; 20S Proteasome A And B Subunit

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTYCLGIITRFGLVMAADSRTHAGVDYVSTYQKLFDFSVPEERVILICTSGNLSITQGVLTEVQRDLRQPESSNLHTFPH
LYDVARYLGSKIRYIQEQDRPWLEKDGIDAQCSLLLGGQIRGEEPALFLIYSQGNCIQATPETPFLQMGETKYGKPILDR
ILSYETSLADAAKCALLSIDSTMKSNISVGPPIDLVMVQADQFKVTHRLRLRTRDPYLAKMRKLWESALKQAFDQMPPIE
WNHSDPADADQEELID

Sequences:

>Translated_256_residues
MTYCLGIITRFGLVMAADSRTHAGVDYVSTYQKLFDFSVPEERVILICTSGNLSITQGVLTEVQRDLRQPESSNLHTFPH
LYDVARYLGSKIRYIQEQDRPWLEKDGIDAQCSLLLGGQIRGEEPALFLIYSQGNCIQATPETPFLQMGETKYGKPILDR
ILSYETSLADAAKCALLSIDSTMKSNISVGPPIDLVMVQADQFKVTHRLRLRTRDPYLAKMRKLWESALKQAFDQMPPIE
WNHSDPADADQEELID
>Mature_255_residues
TYCLGIITRFGLVMAADSRTHAGVDYVSTYQKLFDFSVPEERVILICTSGNLSITQGVLTEVQRDLRQPESSNLHTFPHL
YDVARYLGSKIRYIQEQDRPWLEKDGIDAQCSLLLGGQIRGEEPALFLIYSQGNCIQATPETPFLQMGETKYGKPILDRI
LSYETSLADAAKCALLSIDSTMKSNISVGPPIDLVMVQADQFKVTHRLRLRTRDPYLAKMRKLWESALKQAFDQMPPIEW
NHSDPADADQEELID

Specific function: Unknown

COG id: COG3484

COG function: function code O; Predicted proteasome-type protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28961; Mature: 28830

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYCLGIITRFGLVMAADSRTHAGVDYVSTYQKLFDFSVPEERVILICTSGNLSITQGVL
CHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHH
TEVQRDLRQPESSNLHTFPHLYDVARYLGSKIRYIQEQDRPWLEKDGIDAQCSLLLGGQI
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEE
RGEEPALFLIYSQGNCIQATPETPFLQMGETKYGKPILDRILSYETSLADAAKCALLSID
CCCCCEEEEEECCCCEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEC
STMKSNISVGPPIDLVMVQADQFKVTHRLRLRTRDPYLAKMRKLWESALKQAFDQMPPIE
HHHHCCCCCCCCCEEEEEECCCEEEEHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
WNHSDPADADQEELID
CCCCCCCCCCHHHHCC
>Mature Secondary Structure 
TYCLGIITRFGLVMAADSRTHAGVDYVSTYQKLFDFSVPEERVILICTSGNLSITQGVL
HHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHH
TEVQRDLRQPESSNLHTFPHLYDVARYLGSKIRYIQEQDRPWLEKDGIDAQCSLLLGGQI
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEE
RGEEPALFLIYSQGNCIQATPETPFLQMGETKYGKPILDRILSYETSLADAAKCALLSID
CCCCCEEEEEECCCCEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEC
STMKSNISVGPPIDLVMVQADQFKVTHRLRLRTRDPYLAKMRKLWESALKQAFDQMPPIE
HHHHCCCCCCCCCEEEEEECCCEEEEHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
WNHSDPADADQEELID
CCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA