| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605257
Identifier: 86605257
GI number: 86605257
Start: 553736
End: 553993
Strand: Reverse
Name: 86605257
Synonym: CYA_0540
Alternate gene names: NA
Gene position: 553993-553736 (Counterclockwise)
Preceding gene: 86605263
Following gene: 86605254
Centisome position: 18.89
GC content: 56.98
Gene sequence:
>258_bases ATGAAAAGATACGTTTTCGTCAACCGTTCTCAGCAGGTTCAGGTCATCCGAACAATTCCCGGCCACTGGGAGCGCACCCT CTTCCCCGGCCAGTATGCCATTTTCGAGGCAGAGCCGGACGACTACCTGGAGGTTTATAGCTGCTGCTGTTCTACCACCA TTTTGGAAGAGCGCCACCCCTGCCGCCGTTTGTTGGACTCCTCACTGCCTGAGGCTGACCCCCACCTGGACAGGCTGGCA GATGCAGTGAACGGATGA
Upstream 100 bases:
>100_bases CGATCCCCGTCTTGCCCGTTGGCTATTGTCGGCTGGGGATCAAGAGTGATAGCCTGGCTTAAAGCCAATAAGTTTTTCTT AAGGCGATTAAAAAAACGCA
Downstream 100 bases:
>100_bases ATCAGCTTGGGGATCCCGGCTCCTGAGGCCGAGCCTCGGTTTCCTCGCAGGGCAGCTCGGCAGAGGGGGCATCGGGAGGA CGGGTGAGGCAACTGCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MKRYVFVNRSQQVQVIRTIPGHWERTLFPGQYAIFEAEPDDYLEVYSCCCSTTILEERHPCRRLLDSSLPEADPHLDRLA DAVNG
Sequences:
>Translated_85_residues MKRYVFVNRSQQVQVIRTIPGHWERTLFPGQYAIFEAEPDDYLEVYSCCCSTTILEERHPCRRLLDSSLPEADPHLDRLA DAVNG >Mature_85_residues MKRYVFVNRSQQVQVIRTIPGHWERTLFPGQYAIFEAEPDDYLEVYSCCCSTTILEERHPCRRLLDSSLPEADPHLDRLA DAVNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9868; Mature: 9868
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYVFVNRSQQVQVIRTIPGHWERTLFPGQYAIFEAEPDDYLEVYSCCCSTTILEERHP CCCEEEECCCCCEEEEECCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCH CRRLLDSSLPEADPHLDRLADAVNG HHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKRYVFVNRSQQVQVIRTIPGHWERTLFPGQYAIFEAEPDDYLEVYSCCCSTTILEERHP CCCEEEECCCCCEEEEECCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCH CRRLLDSSLPEADPHLDRLADAVNG HHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA