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The map label for this gene is 86605240

Identifier: 86605240

GI number: 86605240

Start: 539316

End: 539795

Strand: Reverse

Name: 86605240

Synonym: CYA_0523

Alternate gene names: NA

Gene position: 539795-539316 (Counterclockwise)

Preceding gene: 86605241

Following gene: 86605239

Centisome position: 18.41

GC content: 57.29

Gene sequence:

>480_bases
ATGATGCTGATGAATTCAAGCGTGGCCGAGCTGATGCAGCAAAGCGAGGGTCGCTATCTGTGCCCAGATGAGTTGAAAAC
CCTACACGCCTACGTGGAAGGGATCCCCAAACGAGTCCGCCTGTATCAAGTCCTGCAGGCCAAGGAGCAGGAGCTGGTGG
ATTGGGTGATGGAAAAGTTCCAACAGATGATGCCGAATTTGCCCCGCCAACATGGGCACCTGGCCTGGGAGCGCTGCCGC
CGCGACCTGATCATGGTGTGGCGCTACTGCTGCCTGGCTATGCTGCTCAATGACGAGGATTACCTGCGGGATAAGTTGCT
CTACTGGCTGGAGACGATCCTGAAATCTTTCAAGATGCGCGACCAGTGCCAGCCCGCCTACAAGTTGATGCTCGACTCCC
TCAGCGCTGTTTTCGGCCCCGAAGAGAGCGAGTCCATCCGCCCCTACGTGCTCTTGGCCAAGTCGATGCTGGTCAACTAG

Upstream 100 bases:

>100_bases
TCTTCTGCCCCTTTGCCTAAAGCCAAGGCAGAAGGGGCCTCGGAACCGGCACCTACCCTGATGGAAATGTTCGCGTAAGA
CCAGCCAACGGAGGCTCCCG

Downstream 100 bases:

>100_bases
AGTCCAGAGGACAGCCATGACCACCCTGCAAGAGCTCCTGCAAGACCAGATCCTGCCCGGCCACTGCTTCAGCCCTGCCT
ACTACATCCGCCCCGACATC

Product: phycobilisome protein

Products: NA

Alternate protein names: Allophycocyanin Alpha Subunit ApcA; Allophycocyanin Alpha Subunit; Allophycocyanin Beta-18 Subunit

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MMLMNSSVAELMQQSEGRYLCPDELKTLHAYVEGIPKRVRLYQVLQAKEQELVDWVMEKFQQMMPNLPRQHGHLAWERCR
RDLIMVWRYCCLAMLLNDEDYLRDKLLYWLETILKSFKMRDQCQPAYKLMLDSLSAVFGPEESESIRPYVLLAKSMLVN

Sequences:

>Translated_159_residues
MMLMNSSVAELMQQSEGRYLCPDELKTLHAYVEGIPKRVRLYQVLQAKEQELVDWVMEKFQQMMPNLPRQHGHLAWERCR
RDLIMVWRYCCLAMLLNDEDYLRDKLLYWLETILKSFKMRDQCQPAYKLMLDSLSAVFGPEESESIRPYVLLAKSMLVN
>Mature_159_residues
MMLMNSSVAELMQQSEGRYLCPDELKTLHAYVEGIPKRVRLYQVLQAKEQELVDWVMEKFQQMMPNLPRQHGHLAWERCR
RDLIMVWRYCCLAMLLNDEDYLRDKLLYWLETILKSFKMRDQCQPAYKLMLDSLSAVFGPEESESIRPYVLLAKSMLVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18956; Mature: 18956

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLMNSSVAELMQQSEGRYLCPDELKTLHAYVEGIPKRVRLYQVLQAKEQELVDWVMEKF
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQMMPNLPRQHGHLAWERCRRDLIMVWRYCCLAMLLNDEDYLRDKLLYWLETILKSFKMR
HHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
DQCQPAYKLMLDSLSAVFGPEESESIRPYVLLAKSMLVN
HHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MMLMNSSVAELMQQSEGRYLCPDELKTLHAYVEGIPKRVRLYQVLQAKEQELVDWVMEKF
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQMMPNLPRQHGHLAWERCRRDLIMVWRYCCLAMLLNDEDYLRDKLLYWLETILKSFKMR
HHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
DQCQPAYKLMLDSLSAVFGPEESESIRPYVLLAKSMLVN
HHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA