Click here to switch to the map view.

The map label for this gene is 86605239

Identifier: 86605239

GI number: 86605239

Start: 538610

End: 539299

Strand: Reverse

Name: 86605239

Synonym: CYA_0522

Alternate gene names: NA

Gene position: 539299-538610 (Counterclockwise)

Preceding gene: 86605240

Following gene: 86605238

Centisome position: 18.39

GC content: 64.35

Gene sequence:

>690_bases
ATGACCACCCTGCAAGAGCTCCTGCAAGACCAGATCCTGCCCGGCCACTGCTTCAGCCCTGCCTACTACATCCGCCCCGA
CATCCACAGCGGCCTGCTCTACAGCCGGGGAGGATACCGCCTGGCGGCCTTTCCCATGCCCCTCTTGGAAGCCATCTACG
CCGGCTTGCGCTACGAAACCGGCCAAGCCACCCGCGTCATCCTCTACAACTGTGGTCGCGAGTGGGGAGAGGCGTTTTTC
CGCCGCATTGAAGACGAACTCTCCCGCTACTACCAACAGCCGTTGCAGGAATTGCCGATGGGGATCTTCCTCGATGCCCT
CAGCGATCTCTGGGCCACCCACGGCTGGGGCCGCCTGGAGCTGGATTTTTCCGCCGCCGACCGCGGCCTGGTTCAAGCCA
AGATCCGCAACTCCGGCTTTGCCCTGGCTGCTCGTGCCAGCCTTAGGCCGGAGGAACTGTCTGCGCGGCGGGAGCCGGCT
GGCCATCTGGAGGCGGGCATGCTGGCCGGCCTCTTCTCCTTGCTCTCGGAACGGGATCTAGTCTGTGTGCAGACCACCTG
CGAGTCCCTGGGGGCCGACCTCAACCGCTTCCTCATCGGCACCGCCCAGCGCCTGCACAATTGTGAAGAATGGGTGCGCA
AAGGCCTCTCCCACGAGGAGATTTGGGATCGGCTGGCCGCCGGTTCCTAG

Upstream 100 bases:

>100_bases
TCCCTCAGCGCTGTTTTCGGCCCCGAAGAGAGCGAGTCCATCCGCCCCTACGTGCTCTTGGCCAAGTCGATGCTGGTCAA
CTAGAGTCCAGAGGACAGCC

Downstream 100 bases:

>100_bases
GGAGGGATCCCTGCTGAAGACCCATGTTTCCAGGCTGGCAGAGAAGGAGAGAATTGAATTTTTCTGGGTCTTAAGACTTG
TAAAGACAAAGACAAATCTC

Product: V4R domain-containing protein

Products: NA

Alternate protein names: V4R Domain-Containing Protein; Bacteriochlorophyll 4-Vinyl Reductase

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MTTLQELLQDQILPGHCFSPAYYIRPDIHSGLLYSRGGYRLAAFPMPLLEAIYAGLRYETGQATRVILYNCGREWGEAFF
RRIEDELSRYYQQPLQELPMGIFLDALSDLWATHGWGRLELDFSAADRGLVQAKIRNSGFALAARASLRPEELSARREPA
GHLEAGMLAGLFSLLSERDLVCVQTTCESLGADLNRFLIGTAQRLHNCEEWVRKGLSHEEIWDRLAAGS

Sequences:

>Translated_229_residues
MTTLQELLQDQILPGHCFSPAYYIRPDIHSGLLYSRGGYRLAAFPMPLLEAIYAGLRYETGQATRVILYNCGREWGEAFF
RRIEDELSRYYQQPLQELPMGIFLDALSDLWATHGWGRLELDFSAADRGLVQAKIRNSGFALAARASLRPEELSARREPA
GHLEAGMLAGLFSLLSERDLVCVQTTCESLGADLNRFLIGTAQRLHNCEEWVRKGLSHEEIWDRLAAGS
>Mature_228_residues
TTLQELLQDQILPGHCFSPAYYIRPDIHSGLLYSRGGYRLAAFPMPLLEAIYAGLRYETGQATRVILYNCGREWGEAFFR
RIEDELSRYYQQPLQELPMGIFLDALSDLWATHGWGRLELDFSAADRGLVQAKIRNSGFALAARASLRPEELSARREPAG
HLEAGMLAGLFSLLSERDLVCVQTTCESLGADLNRFLIGTAQRLHNCEEWVRKGLSHEEIWDRLAAGS

Specific function: Unknown

COG id: COG1719

COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25821; Mature: 25690

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLQELLQDQILPGHCFSPAYYIRPDIHSGLLYSRGGYRLAAFPMPLLEAIYAGLRYET
CCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEECCCCCEEEECCHHHHHHHHHHCCCCC
GQATRVILYNCGREWGEAFFRRIEDELSRYYQQPLQELPMGIFLDALSDLWATHGWGRLE
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEE
LDFSAADRGLVQAKIRNSGFALAARASLRPEELSARREPAGHLEAGMLAGLFSLLSERDL
EECCHHCCCHHHHHHCCCCCEEEHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
VCVQTTCESLGADLNRFLIGTAQRLHNCEEWVRKGLSHEEIWDRLAAGS
CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TTLQELLQDQILPGHCFSPAYYIRPDIHSGLLYSRGGYRLAAFPMPLLEAIYAGLRYET
CHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEECCCCCEEEECCHHHHHHHHHHCCCCC
GQATRVILYNCGREWGEAFFRRIEDELSRYYQQPLQELPMGIFLDALSDLWATHGWGRLE
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEE
LDFSAADRGLVQAKIRNSGFALAARASLRPEELSARREPAGHLEAGMLAGLFSLLSERDL
EECCHHCCCHHHHHHCCCCCEEEHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
VCVQTTCESLGADLNRFLIGTAQRLHNCEEWVRKGLSHEEIWDRLAAGS
CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA