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The map label for this gene is 86605223

Identifier: 86605223

GI number: 86605223

Start: 524217

End: 524708

Strand: Reverse

Name: 86605223

Synonym: CYA_0506

Alternate gene names: NA

Gene position: 524708-524217 (Counterclockwise)

Preceding gene: 86605228

Following gene: 86605222

Centisome position: 17.89

GC content: 56.3

Gene sequence:

>492_bases
ATGGCCAAGTTGTTGTTGGGGGATCAGTCCTTTGAAGTTGAGCTGCTGACGGATGTGCCCACCAATTGGCCTGGAATTAA
AATCATGTCCAAGGGCGCCAAACTGGATATCCCAGCAGGAACAGTGGTGAGGGTGGAGTCGGAAGATGACCATGTAACCG
GCTCTTACAAGGTGGTTTATCGTCTGGCTCCCGCCTATCCTCGCAGTTGGCGGCTGCTTCTGGAGCGGGAGAGTGCCGCT
GCACCGCAAGCGGAAGCGGCTCCAGCGACCAAACCTGCTCAGGTTGCCCCTTCGGCAGCCTCGTCCCTGCCCAACAGCGA
CAAGATCTTCACCATCAAGGTAGCCGGTCTGGTGGGAGGGGGCGTGCGCAAAAGCGTTGTCGAGTACAAAGTGCCCTTCA
GCCGCCTTTCTCAAGAAGTAAAGCGGATTACCCAAAGGGGGGGCAAGATCGTCAGCATTACGGAGTCCAATTTGTTGAGC
AACCTCGACTAA

Upstream 100 bases:

>100_bases
AGGGGGTGCAGCCGCAACGGTAAAATGTCTAGCGGTGAAGCCGTGGTCGGCCACAGATCTTCGGCTGCCGCCTGCTGATG
AGCAAAACGGAGTTATTCAC

Downstream 100 bases:

>100_bases
CTTGCCTGGAAGGCATCTGGGGCGGTGGGCTTTGGCTCTGCTGCCACTTCTATGGGCTGGGGTGCTACCTGGGCGAGGAA
AGGGATCCCTGGGCGTTTTG

Product: phycobilisome linker polypeptide, phycocyanin-associated, rod

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MAKLLLGDQSFEVELLTDVPTNWPGIKIMSKGAKLDIPAGTVVRVESEDDHVTGSYKVVYRLAPAYPRSWRLLLERESAA
APQAEAAPATKPAQVAPSAASSLPNSDKIFTIKVAGLVGGGVRKSVVEYKVPFSRLSQEVKRITQRGGKIVSITESNLLS
NLD

Sequences:

>Translated_163_residues
MAKLLLGDQSFEVELLTDVPTNWPGIKIMSKGAKLDIPAGTVVRVESEDDHVTGSYKVVYRLAPAYPRSWRLLLERESAA
APQAEAAPATKPAQVAPSAASSLPNSDKIFTIKVAGLVGGGVRKSVVEYKVPFSRLSQEVKRITQRGGKIVSITESNLLS
NLD
>Mature_162_residues
AKLLLGDQSFEVELLTDVPTNWPGIKIMSKGAKLDIPAGTVVRVESEDDHVTGSYKVVYRLAPAYPRSWRLLLERESAAA
PQAEAAPATKPAQVAPSAASSLPNSDKIFTIKVAGLVGGGVRKSVVEYKVPFSRLSQEVKRITQRGGKIVSITESNLLSN
LD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17529; Mature: 17398

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLLLGDQSFEVELLTDVPTNWPGIKIMSKGAKLDIPAGTVVRVESEDDHVTGSYKVVY
CCEEEECCCCCEEEEEECCCCCCCCEEEEECCCEEECCCCEEEEEECCCCCCCCCEEEEE
RLAPAYPRSWRLLLERESAAAPQAEAAPATKPAQVAPSAASSLPNSDKIFTIKVAGLVGG
EECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECEECC
GVRKSVVEYKVPFSRLSQEVKRITQRGGKIVSITESNLLSNLD
CHHHHHHHEECCHHHHHHHHHHHHHCCCEEEEEECCCHHCCCC
>Mature Secondary Structure 
AKLLLGDQSFEVELLTDVPTNWPGIKIMSKGAKLDIPAGTVVRVESEDDHVTGSYKVVY
CEEEECCCCCEEEEEECCCCCCCCEEEEECCCEEECCCCEEEEEECCCCCCCCCEEEEE
RLAPAYPRSWRLLLERESAAAPQAEAAPATKPAQVAPSAASSLPNSDKIFTIKVAGLVGG
EECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECEECC
GVRKSVVEYKVPFSRLSQEVKRITQRGGKIVSITESNLLSNLD
CHHHHHHHEECCHHHHHHHHHHHHHCCCEEEEEECCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA