| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605215
Identifier: 86605215
GI number: 86605215
Start: 512401
End: 512853
Strand: Reverse
Name: 86605215
Synonym: CYA_0497
Alternate gene names: NA
Gene position: 512853-512401 (Counterclockwise)
Preceding gene: 86605216
Following gene: 86605214
Centisome position: 17.49
GC content: 58.94
Gene sequence:
>453_bases GTGGCGTTTTCCTCTCCCCACAAGTGGCCTCGGCAGAAATCGTCCCTGCGAGTGGCTCAGCCCATCGAGCCCACCAAAAT TTACCCCTGCCCCTGTTGCCACCAAGGTCAGTTGCGCCTGATTACCCTGACTGAGGCTTTTGGCTGCAGCCGTTGCCAGC ATATTTTCGCCATCACCCCCGACCGTTTGCACATTGAGCAACTGGCCGTCTCCTACCCCTACCGTAAAATCTGGTTCTGG AACGGCCATCAGTGGGTGTTGCACCGGCAAAGCACTTTCCAGGGATCTGCGCTCTTGGGCCTCACCCTCAGCCTGGGGGT TGCTTTGGCGGTGGGGTTTCTGGGCGTGTTGCTCTTCCCCAGCCAAGCCCAGTTGCTCAGTTGGTTCCTGATTCTTTGCC TGTTGCTGACGCTGTTGATGGTGACGGCGATCCTGCTGCTGCGGCGGCCTTGA
Upstream 100 bases:
>100_bases GATCTTGACCTGGCGCTACGTCCACCATCTCTGGGTGGCTTGACCCTGCTTTCTTGAGGATAGGATGTGAGGGATCCCGA CTTCTCACCGACTGAGAGCT
Downstream 100 bases:
>100_bases GATGCTTGGGATCGTTGCCAGGGATCCCTAGTTTCAGCCCTTGTGGATCTAGCCATTTCTTGTTAGCAGTGGTCAGGAGC AGGTCTGTCGTCGGTCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MAFSSPHKWPRQKSSLRVAQPIEPTKIYPCPCCHQGQLRLITLTEAFGCSRCQHIFAITPDRLHIEQLAVSYPYRKIWFW NGHQWVLHRQSTFQGSALLGLTLSLGVALAVGFLGVLLFPSQAQLLSWFLILCLLLTLLMVTAILLLRRP
Sequences:
>Translated_150_residues MAFSSPHKWPRQKSSLRVAQPIEPTKIYPCPCCHQGQLRLITLTEAFGCSRCQHIFAITPDRLHIEQLAVSYPYRKIWFW NGHQWVLHRQSTFQGSALLGLTLSLGVALAVGFLGVLLFPSQAQLLSWFLILCLLLTLLMVTAILLLRRP >Mature_149_residues AFSSPHKWPRQKSSLRVAQPIEPTKIYPCPCCHQGQLRLITLTEAFGCSRCQHIFAITPDRLHIEQLAVSYPYRKIWFWN GHQWVLHRQSTFQGSALLGLTLSLGVALAVGFLGVLLFPSQAQLLSWFLILCLLLTLLMVTAILLLRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17051; Mature: 16919
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSSPHKWPRQKSSLRVAQPIEPTKIYPCPCCHQGQLRLITLTEAFGCSRCQHIFAITP CCCCCCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCEEEEEEECHHCCHHHCEEEEECC DRLHIEQLAVSYPYRKIWFWNGHQWVLHRQSTFQGSALLGLTLSLGVALAVGFLGVLLFP CHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC SQAQLLSWFLILCLLLTLLMVTAILLLRRP CHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFSSPHKWPRQKSSLRVAQPIEPTKIYPCPCCHQGQLRLITLTEAFGCSRCQHIFAITP CCCCCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCEEEEEEECHHCCHHHCEEEEECC DRLHIEQLAVSYPYRKIWFWNGHQWVLHRQSTFQGSALLGLTLSLGVALAVGFLGVLLFP CHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC SQAQLLSWFLILCLLLTLLMVTAILLLRRP CHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA