Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605215

Identifier: 86605215

GI number: 86605215

Start: 512401

End: 512853

Strand: Reverse

Name: 86605215

Synonym: CYA_0497

Alternate gene names: NA

Gene position: 512853-512401 (Counterclockwise)

Preceding gene: 86605216

Following gene: 86605214

Centisome position: 17.49

GC content: 58.94

Gene sequence:

>453_bases
GTGGCGTTTTCCTCTCCCCACAAGTGGCCTCGGCAGAAATCGTCCCTGCGAGTGGCTCAGCCCATCGAGCCCACCAAAAT
TTACCCCTGCCCCTGTTGCCACCAAGGTCAGTTGCGCCTGATTACCCTGACTGAGGCTTTTGGCTGCAGCCGTTGCCAGC
ATATTTTCGCCATCACCCCCGACCGTTTGCACATTGAGCAACTGGCCGTCTCCTACCCCTACCGTAAAATCTGGTTCTGG
AACGGCCATCAGTGGGTGTTGCACCGGCAAAGCACTTTCCAGGGATCTGCGCTCTTGGGCCTCACCCTCAGCCTGGGGGT
TGCTTTGGCGGTGGGGTTTCTGGGCGTGTTGCTCTTCCCCAGCCAAGCCCAGTTGCTCAGTTGGTTCCTGATTCTTTGCC
TGTTGCTGACGCTGTTGATGGTGACGGCGATCCTGCTGCTGCGGCGGCCTTGA

Upstream 100 bases:

>100_bases
GATCTTGACCTGGCGCTACGTCCACCATCTCTGGGTGGCTTGACCCTGCTTTCTTGAGGATAGGATGTGAGGGATCCCGA
CTTCTCACCGACTGAGAGCT

Downstream 100 bases:

>100_bases
GATGCTTGGGATCGTTGCCAGGGATCCCTAGTTTCAGCCCTTGTGGATCTAGCCATTTCTTGTTAGCAGTGGTCAGGAGC
AGGTCTGTCGTCGGTCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MAFSSPHKWPRQKSSLRVAQPIEPTKIYPCPCCHQGQLRLITLTEAFGCSRCQHIFAITPDRLHIEQLAVSYPYRKIWFW
NGHQWVLHRQSTFQGSALLGLTLSLGVALAVGFLGVLLFPSQAQLLSWFLILCLLLTLLMVTAILLLRRP

Sequences:

>Translated_150_residues
MAFSSPHKWPRQKSSLRVAQPIEPTKIYPCPCCHQGQLRLITLTEAFGCSRCQHIFAITPDRLHIEQLAVSYPYRKIWFW
NGHQWVLHRQSTFQGSALLGLTLSLGVALAVGFLGVLLFPSQAQLLSWFLILCLLLTLLMVTAILLLRRP
>Mature_149_residues
AFSSPHKWPRQKSSLRVAQPIEPTKIYPCPCCHQGQLRLITLTEAFGCSRCQHIFAITPDRLHIEQLAVSYPYRKIWFWN
GHQWVLHRQSTFQGSALLGLTLSLGVALAVGFLGVLLFPSQAQLLSWFLILCLLLTLLMVTAILLLRRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17051; Mature: 16919

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSSPHKWPRQKSSLRVAQPIEPTKIYPCPCCHQGQLRLITLTEAFGCSRCQHIFAITP
CCCCCCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCEEEEEEECHHCCHHHCEEEEECC
DRLHIEQLAVSYPYRKIWFWNGHQWVLHRQSTFQGSALLGLTLSLGVALAVGFLGVLLFP
CHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SQAQLLSWFLILCLLLTLLMVTAILLLRRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFSSPHKWPRQKSSLRVAQPIEPTKIYPCPCCHQGQLRLITLTEAFGCSRCQHIFAITP
CCCCCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCEEEEEEECHHCCHHHCEEEEECC
DRLHIEQLAVSYPYRKIWFWNGHQWVLHRQSTFQGSALLGLTLSLGVALAVGFLGVLLFP
CHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SQAQLLSWFLILCLLLTLLMVTAILLLRRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA